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L1_007_365G1_scaffold_1605

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1605_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..463
DNA (462bp) protein (154aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZP1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG91938.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
XRE family transcriptional regulator
L1_007_365G1_scaffold_1605_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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630..1088
DNA (459bp) protein (153aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8L8_9FIRM
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:CBL01181.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_1605_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1066..1227
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZN30_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM99125.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_007_365G1_scaffold_1605_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1283..2398
DNA (1116bp) protein (372aa)
5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL09_9FIRM
5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase {ECO:0000313|EMBL:CCZ78963.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Methionine synthase II (cobalamin-independent)
L1_007_365G1_scaffold_1605_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2849..3295
DNA (447bp) protein (149aa)
Transcriptional regulator MarR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V455_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ78226.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
L1_007_365G1_scaffold_1605_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3288..4649
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXK5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEG36043.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_1605_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4830..6620
DNA (1791bp) protein (597aa)
Sensor histidine kinase YpdA {ECO:0000313|EMBL:KJJ66312.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ66312.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDX2_9CLOT
signal transduction histidine kinase LytS
L1_007_365G1_scaffold_1605_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6601..8193
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78602.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
response regulator receiver protein
L1_007_365G1_scaffold_1605_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8190..9452
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78603.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter substrate-binding protein
L1_007_365G1_scaffold_1605_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9562..10851
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78604.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter substrate-binding protein
L1_007_365G1_scaffold_1605_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10913..11800
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78605.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_1605_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11797..12666
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V597_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78606.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_007_365G1_scaffold_1605_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12701..14806
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78607.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
alpha-galactosidase
L1_007_365G1_scaffold_1605_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14820..15185)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78608.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_1605_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15427..15756
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78609.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Displaying 15 items

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