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L1_007_365G1_scaffold_1632

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1632_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..272
-----------------
DNA (270bp)
protein (90aa)
Fe2+/Zn2+ uptake regulation protein n=18 Tax=Bifidobacterium RepID=B3DT62_BIFLD
metal uptake regulator
Probable metal uptake regulator similar to ferric uptake regulator protein {ECO:0000313|EMBL:AAN24935.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1632_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(307..522)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=17 Tax=Bifidobacterium RepID=Q8G590_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ22384.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1632_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(497..652)
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E823_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54167.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
ABC transporter permease
L1_007_365G1_scaffold_1632_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

784..1671
-----------------
DNA (888bp)
protein (296aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSA3_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70647.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_365G1_scaffold_1632_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1932..4007
-----------------
DNA (2076bp)
protein (692aa)
Arylsulfatase {ECO:0000313|EMBL:EEI81151.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEI81151.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
MdoB1 n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4QZS1_BIFLM
mdoB1; mdob1
L1_007_365G1_scaffold_1632_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4117..5766
-----------------
DNA (1650bp)
protein (550aa)
Aldehyde dehydrogenase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATK1_BIFLN
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
aldehyde dehydrogenase
L1_007_365G1_scaffold_1632_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6141..7409)
-----------------
DNA (1269bp)
protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Phosphoribosylamine--glycine ligase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATK4_BIFLN
phosphoribosylamine-glycine ligase
L1_007_365G1_scaffold_1632_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7436..8392)
-----------------
DNA (957bp)
protein (319aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=5 Tax=Bifidobacterium longum RepID=D6D9I3_BIFLN
purM; purm
L1_007_365G1_scaffold_1632_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8564..10075)
-----------------
DNA (1512bp)
protein (504aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Amidophosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZT38_BIFLJ
L1_007_365G1_scaffold_1632_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10479..11264)
-----------------
DNA (786bp)
protein (262aa)
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) n=15 Tax=Bifidobacterium RepID=D6D9I2_BIFLN
amino acid ABC transporter ATP-binding protein
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43481.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1632_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11261..12148)
-----------------
DNA (888bp)
protein (296aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATJ1_BIFLN
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ32206.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
polar amino acid ABC transporter inner membrane subunit
L1_007_365G1_scaffold_1632_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12258..13121)
-----------------
DNA (864bp)
protein (288aa)
Amino acid ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU77_BIFLS
extracellular solute-binding protein, family 3
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:ACJ53023.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_365G1_scaffold_1632_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13327..13797)
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G599_BIFLO
hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ22380.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1632_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13867..15240)
-----------------
DNA (1374bp)
protein (458aa)
Cytosine deaminase n=17 Tax=Bifidobacterium RepID=B3DT50_BIFLD
chlorohydrolase
Possible chlorohydrolase-like protein {ECO:0000313|EMBL:AAN24923.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1632_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15280..16782)
-----------------
DNA (1503bp)
protein (501aa)
Adenosylhomocysteinase {ECO:0000313|EMBL:CEF05121.1}; EC=3.3.1.1 {ECO:0000313|EMBL:CEF05121.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
S-adenosyl-L-homocysteine hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ATS3_BIFLN
S-adenosyl-L-homocysteine hydrolase
L1_007_365G1_scaffold_1632_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16947..18536
-----------------
DNA (1590bp)
protein (530aa)
Nucleotidyltransferase/DNA polymerase for DNA repair n=3 Tax=Bifidobacterium RepID=B3DT48_BIFLD
Nucleotidyltransferase/DNA polymerase for DNA repair {ECO:0000313|EMBL:ACD98317.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
dinP1; Nucleotidyltransferase/DNA polymerase for DNA repair
L1_007_365G1_scaffold_1632_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18533..18751
-----------------
DNA (219bp)
protein (73aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=V6XV04_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81139.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_365G1_scaffold_1632_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18785..19762)
-----------------
DNA (978bp)
protein (326aa)
Oxidoreductase, aldo/keto reductase family protein n=4 Tax=Bifidobacterium RepID=I3ATE5_BIFLN
tas2; oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CCY95165.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1632_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20001..20270
-----------------
DNA (270bp)
protein (90aa)
Transcriptional regulator n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU71_BIFLS
Transcriptional regulator {ECO:0000313|EMBL:KFI71853.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
transcriptional regulator
L1_007_365G1_scaffold_1632_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20267..21421
-----------------
DNA (1155bp)
protein (385aa)
HipA domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU70_BIFLS
Toxin HipA {ECO:0000313|EMBL:KEY29433.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L1_007_365G1_scaffold_1632_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21452..21802)
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GU69_BIFLS
Uracil-DNA glycosylase {ECO:0000313|EMBL:KEY29432.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
Displaying 21 items

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