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L1_007_365G1_scaffold_1655

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1655_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..503)
DNA (501bp) protein (167aa)
AnsP2 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R240_BIFLM
amino acid transport protein
Amino acid transport protein {ECO:0000313|EMBL:BAJ67507.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_365G1_scaffold_1655_2
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

515..1075
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NG53_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96097.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1655_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(902..4609)
DNA (3708bp) protein (1236aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWC3_BIFLN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEI80465.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ABC transporter permease
L1_007_365G1_scaffold_1655_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4674..4898)
DNA (225bp) protein (75aa)
ABC transporter ATP-binding component n=3 Tax=Bifidobacterium RepID=E8MFN2_BIFL2
ABC transporter ATP-binding protein
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK70240.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1655_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4967..5338)
DNA (372bp) protein (124aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWE1_BIFLN
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:CCY94904.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1655_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5482..6051
DNA (570bp) protein (190aa)
Transcriptional regulator, TetR family n=8 Tax=Bifidobacterium RepID=D6DCM0_BIFLN
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CBK70241.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1655_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6274..7749
DNA (1476bp) protein (492aa)
Amino acid permease-associated region n=2 Tax=Bifidobacterium longum RepID=D6ZWY3_BIFLJ
amino acid permease-associated domain-containing protein
Aromatic amino acid transport protein AroP {ECO:0000313|EMBL:AAN24007.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1655_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7812..9224)
DNA (1413bp) protein (471aa)
Predicted ATPase (AAA+ superfamily) n=6 Tax=Bifidobacterium RepID=D6DCM2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24006.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1655_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9306..9599)
DNA (294bp) protein (98aa)
XpsM protein n=2 Tax=Bifidobacterium RepID=E5XYN3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70244.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1655_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9730..10683
DNA (954bp) protein (318aa)
Transposase and inactivated derivatives n=2 Tax=Bifidobacterium RepID=D6DCM4_BIFLN
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBK70245.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1655_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10809..13928)
DNA (3120bp) protein (1040aa)
Bacterial surface proteins containing Ig-like domains n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DCM5_BIFLN
Arabinosidase {ECO:0000313|EMBL:KEY32318.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Bacterial surface proteins containing Ig-like domains
L1_007_365G1_scaffold_1655_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14341..14946)
DNA (606bp) protein (202aa)
PF04854 family protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3B4A0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK35864.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Protein of unknown function, DUF624.
L1_007_365G1_scaffold_1655_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15152..15994)
DNA (843bp) protein (281aa)
Oligosaccharide ABC transporter permease component n=5 Tax=Bifidobacterium RepID=E8MFP3_BIFL2
oligosaccharide ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD94716.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_365G1_scaffold_1655_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15994..16749)
DNA (756bp) protein (252aa)
Permease of ABC transporter possibly for oligosaccharides n=16 Tax=Bifidobacterium RepID=Q8G7U8_BIFLO
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ55909.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_365G1_scaffold_1655_15
unknown

Not on your lists

16751..16867
DNA (117bp) protein (39aa)

This feature has no annotations

L1_007_365G1_scaffold_1655_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17231..18247
DNA (1017bp) protein (339aa)
LacI-type response repressor n=14 Tax=Bifidobacterium RepID=B3DP92_BIFLD
transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY20721.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1655_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18502..19716)
DNA (1215bp) protein (405aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=7 Tax=Bifidobacterium RepID=D6DCN2_BIFLN
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK70253.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1655_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20175..20888)
DNA (714bp) protein (238aa)
PhoE n=2 Tax=Bifidobacterium RepID=E4R225_BIFLM
phoE; phoe
Histidine phosphatase {ECO:0000313|EMBL:AIW44409.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1655_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20980..21357
DNA (378bp) protein (126aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=V6XYI9_BIFLN
hypothetical protein
PF14019 family protein {ECO:0000313|EMBL:EIJ26196.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1655_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21540..22307
DNA (768bp) protein (256aa)
Nitroreductase n=2 Tax=Bifidobacterium longum RepID=D6ZWZ3_BIFLJ
nitroreductase
Oxygen-insensitive NADPH nitroreductase {ECO:0000313|EMBL:ESV34326.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_365G1_scaffold_1655_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22600..25329
DNA (2730bp) protein (910aa)
YhgE/Pip domain-containing protein n=2 Tax=Bacteria RepID=E5XYM2_9BIFI
Phage infection protein {ECO:0000313|EMBL:BAP84476.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L1_007_365G1_scaffold_1655_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25326..27665
DNA (2340bp) protein (780aa)
YhgE/Pip C-terminal domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2I421_BIFLN
pip; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP84477.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Displaying 22 items

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