ggKbase home page

L1_007_365G1_scaffold_1672

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1672_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1324
DNA (1323bp) protein (441aa)
Proteasome-associated protein {ECO:0000313|EMBL:KFI73804.1}; EC=6.3.2.- {ECO:0000313|EMBL:KFI73804.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Proteasome accessory factor PafA2 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B2Z7_BIFLN
ligase
L1_007_365G1_scaffold_1672_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1305..1562
DNA (258bp) protein (86aa)
Pup-ligase protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DBJ6_BIFLN
Pup-ligase protein.
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71651.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_007_365G1_scaffold_1672_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1574..2428
DNA (855bp) protein (285aa)
Possible inositol monophosphatase n=15 Tax=Bifidobacterium RepID=Q8G3G4_BIFLO
inositol monophosphatase
Inositol monophosphatase {ECO:0000313|EMBL:AIW44111.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1672_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2495..2722
DNA (228bp) protein (76aa)
Prokaryotic ubiquitin-like protein Pup n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDN3_BIFLI
Ubiquitin-like protein Pup {ECO:0000313|EMBL:EEQ56127.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_365G1_scaffold_1672_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2735..4123
DNA (1389bp) protein (463aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Pup--protein ligase n=4 Tax=Bifidobacterium longum RepID=E8MEK5_BIFL2
hypothetical protein
L1_007_365G1_scaffold_1672_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4239..4520)
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=20 Tax=Bifidobacterium RepID=DBH1_BIFLO
hup; DNA-binding protein HU
DNA-binding protein HB1 {ECO:0000313|EMBL:EIJ30978.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_365G1_scaffold_1672_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4666..6993)
DNA (2328bp) protein (776aa)
Narrowly conserved hypothetical membrane protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3G2_BIFLO
hypothetical protein
Narrowly conserved hypothetical membrane protein {ECO:0000313|EMBL:AAN25582.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1672_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7249..8685)
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KEY33563.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KEY33563.1};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Adenylosuccinate lyase n=10 Tax=Bifidobacterium RepID=B3DRP1_BIFLD
adenylosuccinate lyase
L1_007_365G1_scaffold_1672_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8818..9459
DNA (642bp) protein (214aa)
Predicted membrane protein n=14 Tax=Bifidobacterium RepID=D6DBI9_BIFLN
hypothetical protein
Cobalt ABC transporter, permease protein {ECO:0000313|EMBL:EIJ25121.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1672_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9647..9760)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MX19_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96315.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1672_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10226..11830)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=Q8G3F7_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:KEY33566.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_365G1_scaffold_1672_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11827..12174)
DNA (348bp) protein (116aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=Q8G3F6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25588.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1672_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12418..13047)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDP3_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ56137.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_365G1_scaffold_1672_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13017..14048)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=Q8G3F4_BIFLO
hypothetical protein
von Willebrand factor type A domain protein {ECO:0000313|EMBL:BAP84040.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_365G1_scaffold_1672_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14045..15103)
DNA (1059bp) protein (353aa)
Von Willebrand factor type A-like protein n=10 Tax=Bifidobacterium RepID=B3DRP9_BIFLD
hypothetical protein
von Willebrand factor A {ECO:0000313|EMBL:KEY21649.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1672_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15100..15654)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R0Z6_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK35411.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_007_365G1_scaffold_1672_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15651..16601)
DNA (951bp) protein (317aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=V6XZR2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI73818.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L1_007_365G1_scaffold_1672_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16598..17677)
DNA (1080bp) protein (360aa)
Von Willebrand factor type A domain containing membrane protein n=10 Tax=Bifidobacterium RepID=B3DRQ2_BIFLD
hypothetical protein
ATPase, AAA family {ECO:0000313|EMBL:EIJ31003.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_365G1_scaffold_1672_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17717..18406)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Uracil-DNA glycosylase n=7 Tax=Bifidobacterium RepID=E8MEJ1_BIFL2
uracil-DNA glycosylase
L1_007_365G1_scaffold_1672_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18522..19205
DNA (684bp) protein (228aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=B3DRQ4_BIFLD
hypothetical protein
Cell wall integrity and stress response protein 1 {ECO:0000313|EMBL:KHD94543.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_365G1_scaffold_1672_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19435..19674
DNA (240bp) protein (80aa)
Cold shock protein n=15 Tax=Bifidobacterium RepID=B3DPK3_BIFLD
cold shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EIJ25114.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1672_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19912..21123
DNA (1212bp) protein (404aa)
60 kDa chaperonin n=30 Tax=Bacteria RepID=CH60_BIFLD
chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying 22 items

View Taxonomy