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L1_007_365G1_scaffold_1683

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1683_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..422)
DNA (420bp) protein (140aa)
Possible MarR-type transcriptional regulator n=10 Tax=Bifidobacterium longum RepID=Q8G3Q7_BIFLO
marr-type transcriptional regulator
MarR family protein {ECO:0000313|EMBL:EIJ28365.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_007_365G1_scaffold_1683_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(626..880)
DNA (255bp) protein (85aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DR24_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69962.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1683_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(986..2203)
DNA (1218bp) protein (406aa)
ABC-type xylose transport system permease component n=10 Tax=Bifidobacterium RepID=B3DR23_BIFLD
ABC-type xylose transport system, permease component
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ55353.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_365G1_scaffold_1683_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2203..3756)
DNA (1554bp) protein (518aa)
ABC-type xylose transport system ATPase component n=16 Tax=Bifidobacterium RepID=B3DR22_BIFLD
sugar ABC transporter ATP-binding protein
ABC-type xylose transport system ATPase component {ECO:0000313|EMBL:ACD99305.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1683_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3857..5014)
DNA (1158bp) protein (386aa)
ABC-type xylose transport system periplasmic component n=17 Tax=Bifidobacterium RepID=B3DR21_BIFLD
sugar ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY21534.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1683_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5267..6436
DNA (1170bp) protein (390aa)
NagC-type Transcriptional regulator n=10 Tax=Bifidobacterium RepID=B3DR20_BIFLD
NagC family transcriptional regulator
NagC-type Transcriptional regulator {ECO:0000313|EMBL:ACD99303.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1683_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6474..7340
DNA (867bp) protein (289aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=5 Tax=Bifidobacterium RepID=D6DBU6_BIFLN
ABC transporter ATP-binding protein
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:ACD99302.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1683_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7365..8315)
DNA (951bp) protein (317aa)
Glucokinase n=16 Tax=Bifidobacterium RepID=D6DBU7_BIFLN
glucokinase
NagC family transcriptional regulator {ECO:0000313|EMBL:AIW44186.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1683_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9149..10828
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding component n=4 Tax=Bifidobacterium longum RepID=E8MEW3_BIFL2
ABC transporter ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAJ67240.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_365G1_scaffold_1683_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11140..12039
DNA (900bp) protein (300aa)
Acyl-CoA thioesterase n=12 Tax=Bifidobacterium RepID=F8AT01_BIFLN
acyl-CoA thioesterase
Acyl-CoA thioesterase {ECO:0000313|EMBL:KEY21529.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1683_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12052..12579)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR15_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD99298.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1683_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12754..14037)
DNA (1284bp) protein (428aa)
Dihydroneopterin aldolase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DR14_BIFLD
folB; dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:ACD99297.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1683_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14174..15049)
DNA (876bp) protein (292aa)
Dihydropteroate synthase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASZ8_BIFLN
dihydropteroate synthase
Dihydropteroate synthase {ECO:0000313|EMBL:AEI96888.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_365G1_scaffold_1683_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15137..15736)
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 {ECO:0000255|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000255|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000255|HAMAP-Rule:MF_00223}; Short=GTP-CH-I {ECO:0000255|HAMAP-Rule:MF_00223};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
GTP cyclohydrolase 1 n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=GCH1_BIFLD
folE; GTP cyclohydrolase I
L1_007_365G1_scaffold_1683_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15733..15825)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3I5_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44879.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1683_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15831..17921)
DNA (2091bp) protein (697aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R3I4_BIFLM
hflB; hflb
L1_007_365G1_scaffold_1683_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17918..18481)
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase n=11 Tax=Bifidobacterium RepID=D6ZW14_BIFLJ
hypoxanthine-guanine phosphoribosyltransferase
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CCY96445.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1683_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18468..19634)
DNA (1167bp) protein (389aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASZ4_BIFLN
hypothetical protein
L1_007_365G1_scaffold_1683_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19735..21225)
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ASZ3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI96883.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_365G1_scaffold_1683_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21248..21784)
DNA (537bp) protein (179aa)
Membrane protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8ASZ2_BIFLN
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69979.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying 20 items

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