ggKbase home page

L1_007_365G1_scaffold_1708

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1708_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..2120)
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7P8_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24053.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L1_007_365G1_scaffold_1708_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2462..3868
DNA (1407bp) protein (469aa)
Efflux ABC transporter, permease protein n=2 Tax=Bifidobacterium longum RepID=C5ECU9_BIFLI
peptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:AIW44373.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1708_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3865..4986
DNA (1122bp) protein (374aa)
SalX-type ABC antimicrobial peptide transport system ATPase component n=4 Tax=Bifidobacterium longum RepID=E4R267_BIFLM
salx-type abc antimicrobial peptide transport system atpase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ55844.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_365G1_scaffold_1708_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5110..5814
DNA (705bp) protein (235aa)
HD domain n=5 Tax=Bifidobacterium longum subsp. longum RepID=D6DCJ0_BIFLN
HD domain.
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADH01320.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L1_007_365G1_scaffold_1708_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5889..6749)
DNA (861bp) protein (287aa)
Glutamine amidotransferases class-II n=5 Tax=Bifidobacterium RepID=I3AWD5_BIFLN
glutamine amidotransferase
Glutamine amidotransferases class-II {ECO:0000313|EMBL:EIJ23428.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_007_365G1_scaffold_1708_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6843..9356)
DNA (2514bp) protein (838aa)
Probable potassium transport system protein kup n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWR6_BIFLJ
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
potassium transporter
L1_007_365G1_scaffold_1708_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9499..10458)
DNA (960bp) protein (320aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=10 Tax=Bifidobacterium RepID=D6DCJ3_BIFLN
TatD family hydrolase {ECO:0000313|EMBL:EFV37324.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_365G1_scaffold_1708_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10720..11790
DNA (1071bp) protein (357aa)
Fic/DOC family protein n=4 Tax=Bifidobacterium RepID=E5XYJ4_9BIFI
Cell division protein Fic {ECO:0000313|EMBL:KHD94748.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L1_007_365G1_scaffold_1708_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11719..12036)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7Q6_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24045.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1708_10
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12119..13237)
DNA (1119bp) protein (373aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=9 Tax=Bifidobacterium RepID=D6DCJ5_BIFLN
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV37321.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_365G1_scaffold_1708_11
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13234..14187)
DNA (954bp) protein (318aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=7 Tax=Bifidobacterium RepID=D6DCJ6_BIFLN
sugar permease of ABC transporter system
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:EFV37320.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_365G1_scaffold_1708_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14326..15642)
DNA (1317bp) protein (439aa)
MalE-type ABC sugar transport system periplasmic component n=7 Tax=Bifidobacterium RepID=B3DPD4_BIFLD
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEI80500.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_007_365G1_scaffold_1708_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16060..17094)
DNA (1035bp) protein (345aa)
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:KFI67833.1}; EC=3.2.1.55 {ECO:0000313|EMBL:KFI67833.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glycosyl hydrolase family 43 n=3 Tax=Bacteria RepID=E5XYI9_9BIFI
beta-xylosidase
L1_007_365G1_scaffold_1708_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17358..18302
DNA (945bp) protein (315aa)
Hydrolase, alpha/beta domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3AW47_BIFLN
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:KFI67834.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Esterase/lipase
L1_007_365G1_scaffold_1708_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18456..19514)
DNA (1059bp) protein (353aa)
RbsR-type transcription regulator/Ribose operon repressor n=7 Tax=Bifidobacterium RepID=B3DPD1_BIFLD
RbsR family transcriptional regulator/Ribose operon repressor
RbsR-type transcription regulator/Ribose operon repressor {ECO:0000313|EMBL:ACD98990.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1708_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19630..21762)
DNA (2133bp) protein (711aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3F0_BIFLN
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EIJ31908.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
beta-xylosidase
L1_007_365G1_scaffold_1708_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21878..23473
DNA (1596bp) protein (532aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWC2_BIFLN
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EIJ23415.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
xynB2; beta-xylosidase
L1_007_365G1_scaffold_1708_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23630..25375
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECW7_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55861.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
endo-1,5-alpha-L-arabinosidase
L1_007_365G1_scaffold_1708_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25529..25786)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=I3BM98_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ32491.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L1_007_365G1_scaffold_1708_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25725..27668)
DNA (1944bp) protein (648aa)
Alpha-L-arabinofuranosidase C-terminal domain protein n=5 Tax=Bifidobacterium RepID=I3AW56_BIFLN
Alpha-L-arabinofuranosidase C-terminal domain protein {ECO:0000313|EMBL:CCY96134.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
alpha-arabinofuranosidase I
L1_007_365G1_scaffold_1708_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28260..30068)
DNA (1809bp) protein (603aa)
ABC-type multidrug transport system ATPase and permease component n=13 Tax=Bifidobacterium RepID=B3DPC6_BIFLD
ABC transporter permease component {ECO:0000313|EMBL:BAJ67485.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
mdlB5; multidrug ABC transporter ATPase/permease
L1_007_365G1_scaffold_1708_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30079..31461)
DNA (1383bp) protein (461aa)
Probable permease protein of ABC transporter system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G7R8_BIFLO
multidrug ABC transporter ATP-binding protein
ABC transporter transmembrane region {ECO:0000313|EMBL:EIJ32520.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Displaying 22 items

View Taxonomy