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L1_007_365G1_scaffold_1887

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_1887_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42..983)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GST2_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEQ54532.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_365G1_scaffold_1887_2
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1243..1341
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWZ8_BIFL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96013.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1887_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1525..3003
DNA (1479bp) protein (493aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate--tRNA ligase n=14 Tax=Bifidobacterium RepID=SYE_BIFLD
glutamyl-tRNA synthetase
L1_007_365G1_scaffold_1887_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3933..4421
DNA (489bp) protein (163aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=V6XYY2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54528.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_365G1_scaffold_1887_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4373..4522)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E9B8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ54527.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L1_007_365G1_scaffold_1887_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4818..10481
DNA (5664bp) protein (1888aa)
Endo-alpha-N-acetylgalactosaminidase, cell wall anchored n=1 Tax=Bifidobacterium longum E18 RepID=V6XU10_BIFLN
Endo-alpha-N-acetylgalactosaminidase, cell wall anchored {ECO:0000313|EMBL:ESV32790.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
endo-alpha-N-acetylgalactosaminidase
L1_007_365G1_scaffold_1887_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10695..11579)
DNA (885bp) protein (295aa)
Predicted membrane protein n=8 Tax=Bifidobacterium RepID=D6DAK0_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37235.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_365G1_scaffold_1887_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11743..11856
DNA (114bp) protein (38aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=B3DU82_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95232.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1887_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12960..14771
DNA (1812bp) protein (604aa)
High-affinity Fe2+/Pb2+ permease n=2 Tax=Bifidobacterium longum RepID=B3DU81_BIFLD
ftr1; high-affinity Fe2+/Pb2+ permease
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:ACD98700.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1887_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14945..15628
DNA (684bp) protein (228aa)
Fe2+ high-affinity transport protein n=16 Tax=Bifidobacterium RepID=B3DU80_BIFLD
hypothetical protein
Fe2+ high-affinity transport protein {ECO:0000313|EMBL:ACD98699.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1887_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15778..16941
DNA (1164bp) protein (388aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GSU3_BIFLN
membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:ACD98698.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_365G1_scaffold_1887_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16963..18267
DNA (1305bp) protein (435aa)
SalY-type ABC antimicrobial peptide transport system permease component n=17 Tax=Bifidobacterium RepID=B3DU78_BIFLD
saly-type abc antimicrobial peptide transport system permease component
Possible permease protein of ABC transporter system {ECO:0000313|EMBL:AAN24288.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_365G1_scaffold_1887_13
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18301..19524
DNA (1224bp) protein (408aa)
ABC-type transport system, involved in lipoprotein release, permease component n=8 Tax=Bifidobacterium RepID=D6DAJ4_BIFLN
saly-type abc antimicrobial peptide transport system permease component
SalY-type ABC antimicrobial peptide transport system permease component {ECO:0000313|EMBL:EFV37240.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_365G1_scaffold_1887_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19540..20337
DNA (798bp) protein (266aa)
SalX-type ABC antimicrobial peptide transport system ATPase component n=14 Tax=Bifidobacterium RepID=B3DU76_BIFLD
ABC transporter ATP-binding protein
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIW43217.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_365G1_scaffold_1887_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20453..21016
DNA (564bp) protein (188aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DU75_BIFLD
FMN-binding domain.
Uncharacterized protein {ECO:0000313|EMBL:CCY95239.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_365G1_scaffold_1887_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21022..21621)
DNA (600bp) protein (200aa)
AcrR-type transcriptional regulator n=11 Tax=Bifidobacterium RepID=B3DU74_BIFLD
AcrR family transcriptional regulator
AcrR-type transcriptional regulator {ECO:0000313|EMBL:BAP82837.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_365G1_scaffold_1887_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21736..23898)
DNA (2163bp) protein (721aa)
YhgE/Pip domain protein n=2 Tax=Bacteria RepID=C2GSU9_BIFLN
YhgE/Pip domain protein {ECO:0000313|EMBL:EEI81628.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L1_007_365G1_scaffold_1887_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23895..26525)
DNA (2631bp) protein (877aa)
Hypothetical membrane protein with similarity to phage infection protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NDJ0_9BIFI
Hypothetical membrane protein with similarity to phage infection protein {ECO:0000313|EMBL:CCY95242.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L1_007_365G1_scaffold_1887_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26880..28166
DNA (1287bp) protein (429aa)
Putative membrane protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XU88_BIFLN
Putative membrane protein {ECO:0000313|EMBL:ESV32802.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Predicted membrane protein
L1_007_365G1_scaffold_1887_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28345..29040
DNA (696bp) protein (232aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
6-phosphogluconate dehydrogenase, decarboxylating n=2 Tax=Bifidobacterium longum RepID=B3DU70_BIFLD
6-phosphogluconate dehydrogenase
L1_007_365G1_scaffold_1887_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29037..29708
DNA (672bp) protein (224aa)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
6-phosphogluconate dehydrogenase n=1 Tax=Bifidobacterium longum E18 RepID=V6XUF2_BIFLN
gnd; 6-phosphogluconate dehydrogenase
L1_007_365G1_scaffold_1887_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29849..30691)
DNA (843bp) protein (281aa)
Glucosamine-6-phosphate isomerase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU13_BIFLN
magB; glucosamine-6-phosphate isomerase
6-phosphogluconolactonase {ECO:0000313|EMBL:KHD94619.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L1_007_365G1_scaffold_1887_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30943..31968)
DNA (1026bp) protein (342aa)
Glucose-6-phosphate dehydrogenase assembly protein OpcA n=12 Tax=Bacteria RepID=D6DAI6_BIFLN
glucose-6-p dehydrogenase subunit
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase {ECO:0000313|EMBL:ESV32805.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L1_007_365G1_scaffold_1887_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31965..33503)
DNA (1539bp) protein (513aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glucose-6-phosphate 1-dehydrogenase n=11 Tax=Bifidobacterium RepID=Q8G732_BIFLO
zwf; zwf
L1_007_365G1_scaffold_1887_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33827..35461
DNA (1635bp) protein (545aa)
Dipeptidase (EC:3.4.-.-)
Dipeptidase n=8 Tax=Bifidobacterium RepID=Q8G733_BIFLO
Peptidase C69 {ECO:0000313|EMBL:KEY23561.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_365G1_scaffold_1887_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35535..36569)
DNA (1035bp) protein (345aa)
Glycosyltransferase n=3 Tax=Bifidobacterium RepID=F8ATS9_BIFLN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAP82846.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_365G1_scaffold_1887_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36593..37414)
DNA (822bp) protein (274aa)
AcrR-type transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DU64_BIFLD
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CBK71185.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L1_007_365G1_scaffold_1887_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37522..38799
DNA (1278bp) protein (426aa)
Signal recognition particle receptor FtsY n=10 Tax=Bifidobacterium RepID=E8MGG4_BIFL2
signal recognition particle-docking protein
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_365G1_scaffold_1887_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39228..40229
DNA (1002bp) protein (334aa)
Possible ammonium ion transporter n=4 Tax=Bifidobacterium longum RepID=Q8G737_BIFLO
amtP; ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Displaying 29 items

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