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L1_007_365G1_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 482 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_6_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17..889)
DNA (873bp) protein (291aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BBR2_BIFLN
phage integrase
Phage integrase {ECO:0000313|EMBL:AII76636.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_007_365G1_scaffold_6_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1005..1400
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y1C9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI98225.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_007_365G1_scaffold_6_3
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1417..2997
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT61_BIFL1
Uncharacterized protein {ECO:0000313|EMBL:KFI98226.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_007_365G1_scaffold_6_4
unknown

Not on your lists

comp(3295..4431)
DNA (1137bp) protein (379aa)

This feature has no annotations

L1_007_365G1_scaffold_6_5
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4467..4928
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q4C8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI98228.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_007_365G1_scaffold_6_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4931..5065
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6PE39_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76631.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_007_365G1_scaffold_6_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5065..5451
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUH1_9BIFI
PRTRC system protein E {ECO:0000313|EMBL:KFI98229.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L1_007_365G1_scaffold_6_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5587..6831
DNA (1245bp) protein (415aa)
Phage lysin-like lysozyme M1 n=2 Tax=Bifidobacterium dentium RepID=D2QB91_BIFDB
Phage lysin
Phage lysin {ECO:0000313|EMBL:AJE05773.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_007_365G1_scaffold_6_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6897..7142
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXF2_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05774.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L1_007_365G1_scaffold_6_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7675..9015
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSX5_9BIFI
3-phosphoshikimate 1-carboxyvinyltransferase
L1_007_365G1_scaffold_6_11
unknown

Not on your lists

9354..9515
DNA (162bp) protein (54aa)

This feature has no annotations

L1_007_365G1_scaffold_6_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9638..10081
DNA (444bp) protein (148aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSY0_9BIFI
GNAT family acetyltransferase {ECO:0000313|EMBL:KEF28397.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Predicted P-loop ATPase fused to an acetyltransferase
L1_007_365G1_scaffold_6_13
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10113..10502
DNA (390bp) protein (130aa)
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFZ33961.1}; EC=2.3.1.- {ECO:0000313|EMBL:EFZ33961.1};; TaxID=525362 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis ATCC 25644.;"
Acetyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=E7FSS8_9LACO
L1_007_365G1_scaffold_6_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10806..12368)
DNA (1563bp) protein (521aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Bifidobacterium RepID=C0BSZ1_9BIFI
L1_007_365G1_scaffold_6_15
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12636..13607)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Gardnerella vaginalis AMD RepID=D6SY84_GARVA
Uncharacterized protein {ECO:0000313|EMBL:EFH27144.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;"
L1_007_365G1_scaffold_6_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13627..15228
DNA (1602bp) protein (534aa)
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase n=2 Tax=Bifidobacterium RepID=C0BSZ4_9BIFI
Phosphoketolase {ECO:0000313|EMBL:KEF28395.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
phosphoketolase
L1_007_365G1_scaffold_6_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15429..17099
DNA (1671bp) protein (557aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EEG70496.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EEG70496.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Phosphate acetyltransferase n=2 Tax=Bifidobacterium RepID=C0BSZ5_9BIFI
phosphate acetyltransferase
L1_007_365G1_scaffold_6_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17188..18417
DNA (1230bp) protein (410aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Acetate kinase n=2 Tax=Bifidobacterium RepID=C0BSZ6_9BIFI
acetate kinase
L1_007_365G1_scaffold_6_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18696..20531
DNA (1836bp) protein (612aa)
Acyltransferase n=2 Tax=Bifidobacterium RepID=C0BSZ7_9BIFI
Acyltransferase {ECO:0000313|EMBL:EEG70498.1}; Putative acyltransferase {ECO:0000313|EMBL:BAR03465.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
acetylase
L1_007_365G1_scaffold_6_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20642..22012)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P9F9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15191.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
uracil permease
L1_007_365G1_scaffold_6_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22091..22672)
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Xanthine phosphoribosyltransferase n=2 Tax=Bifidobacterium RepID=C0BSZ9_9BIFI
xanthine phosphoribosyltransferase
L1_007_365G1_scaffold_6_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22863..25520
DNA (2658bp) protein (886aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BT00_9BIFI
ATP-dependent DNA helicase PcrA
L1_007_365G1_scaffold_6_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25640..26038
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BT01_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF28388.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L1_007_365G1_scaffold_6_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26045..27259
DNA (1215bp) protein (405aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BT02_9BIFI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG70503.1}; Putative ABC transporter permease component {ECO:0000313|EMBL:BAR03470.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter permease
L1_007_365G1_scaffold_6_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27259..28095
DNA (837bp) protein (279aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=C0BT03_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28386.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_6_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28374..29000
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BT04_9BIFI
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
rbsD; 30S ribosomal protein S4
L1_007_365G1_scaffold_6_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29128..29511)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6C0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16219.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L1_007_365G1_scaffold_6_28
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29538..30221
DNA (684bp) protein (228aa)
Phosphoglycerate mutase family protein n=2 Tax=Bifidobacterium RepID=C0BT06_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16221.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
fructose-2,6-bisphosphatase
L1_007_365G1_scaffold_6_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30317..30700
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BT07_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16223.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L1_007_365G1_scaffold_6_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30700..30936
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BT08_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF28381.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
Displaying items 1-30 of 482 in total

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