ggKbase home page

L1_007_365G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 281 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_11_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19..483
DNA (465bp) protein (155aa)
Hsp20/alpha crystallin family protein n=3 Tax=Faecalibacterium prausnitzii RepID=A8SC82_9FIRM
heat shock protein Hsp20
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EDP21170.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_365G1_scaffold_11_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(599..1252)
DNA (654bp) protein (218aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
NAD(P)H-hydrate epimerase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Q8_9FIRM
yjeF N-terminal region
L1_007_365G1_scaffold_11_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1455..1697
DNA (243bp) protein (81aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK4_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFQ07690.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted dehydrogenases and related proteins
L1_007_365G1_scaffold_11_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1793..2002
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07691.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_365G1_scaffold_11_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2033..2218
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07692.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_365G1_scaffold_11_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2277..3047
DNA (771bp) protein (257aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK8_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFQ07694.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_365G1_scaffold_11_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3065..3691
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07695.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L1_007_365G1_scaffold_11_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3724..4113
DNA (390bp) protein (130aa)
Oxidoreductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGL0_9FIRM
Oxidoreductase {ECO:0000313|EMBL:EFQ07696.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
C_GCAxxG_C_C family probable redox protein
L1_007_365G1_scaffold_11_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4471..5736
DNA (1266bp) protein (422aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18493.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_007_365G1_scaffold_11_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5723..6784
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BIJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63005.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
cytoplasmic protein
L1_007_365G1_scaffold_11_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6852..8309
DNA (1458bp) protein (486aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KZU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12882.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_007_365G1_scaffold_11_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8383..8685)
DNA (303bp) protein (101aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5C2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU96903.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted transcriptional regulators
L1_007_365G1_scaffold_11_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8863..10002
DNA (1140bp) protein (380aa)
Eco57I restriction endonuclease n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5C3_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEU96904.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_11_14
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10307..11143
DNA (837bp) protein (279aa)
Restriction endonuclease related protein n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EHT6_9SPIO
Restriction endonuclease related protein {ECO:0000313|EMBL:EIC02876.1}; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
Type II restriction endonuclease
L1_007_365G1_scaffold_11_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11143..14445
DNA (3303bp) protein (1101aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL02544.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
hypothetical protein
L1_007_365G1_scaffold_11_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15497..15832
DNA (336bp) protein (112aa)
CGNR zinc finger n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCI2_9FIRM
CGNR zinc finger.
CGNR zinc finger {ECO:0000313|EMBL:CBL02545.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_11_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16240..17583
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0C7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99726.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_11_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17603..18952
DNA (1350bp) protein (450aa)
Virulence-associated protein E n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5D1_9FIRM
Virulence-associated protein E {ECO:0000313|EMBL:EEU96912.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_11_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19164..19358
DNA (195bp) protein (65aa)
DNA binding domain, excisionase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDF1_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDP20877.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
DNA binding domain, excisionase family
L1_007_365G1_scaffold_11_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19443..20639
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZK54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ17367.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_11_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20789..21331
DNA (543bp) protein (181aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL02693.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL02693.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Protein-tyrosine-phosphatase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCY0_9FIRM
L1_007_365G1_scaffold_11_22
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21324..22076
DNA (753bp) protein (251aa)
Methyltransferase domain protein n=4 Tax=Bacteria RepID=E8LDQ9_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EFY05030.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
hypothetical protein
L1_007_365G1_scaffold_11_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22081..22407
DNA (327bp) protein (109aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL02693.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL02693.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Protein-tyrosine-phosphatase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCY0_9FIRM
L1_007_365G1_scaffold_11_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22697..23455
DNA (759bp) protein (253aa)
Putative cyclase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Q3_9FIRM
Putative cyclase {ECO:0000313|EMBL:EDP22385.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted metal-dependent hydrolase
L1_007_365G1_scaffold_11_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23576..24412)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96174.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_11_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24703..25485
DNA (783bp) protein (261aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8F2_9FIRM
Predicted divalent heavy-metal cations transporter
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CBL01115.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_11_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25732..26343
DNA (612bp) protein (204aa)
Methyltransferase domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8Q0_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDP22382.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_365G1_scaffold_11_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26432..27274
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZHH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07369.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
O-Methyltransferase involved in polyketide biosynthesis
L1_007_365G1_scaffold_11_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27271..27471
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYW7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99216.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_11_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27486..28616)
DNA (1131bp) protein (377aa)
Citrate transporter n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8P7_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDP22379.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
transporter, YbiR family
Displaying items 1-30 of 281 in total

View Taxonomy