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L1_007_365G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 475 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_12_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..211
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JA95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77532.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_12_2
unknown

Not on your lists

352..510
DNA (159bp) protein (53aa)

This feature has no annotations

L1_007_365G1_scaffold_12_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

642..1193
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JA93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77530.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_12_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1165..1524)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76732.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Small, acid-soluble spore proteins, alpha/beta type.
L1_007_365G1_scaffold_12_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1814..2209
DNA (396bp) protein (132aa)
Methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Ruminococcus RepID=C6J9A4_9FIRM
Methylglyoxal synthase {ECO:0000313|EMBL:EES78047.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_12_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2188..2757
DNA (570bp) protein (190aa)
RsmD family RNA methyltransferase n=2 Tax=Ruminococcus RepID=C6J9A5_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:EES78048.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA methyltransferase, RsmD family
L1_007_365G1_scaffold_12_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2884..3378
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
pantetheine-phosphate adenylyltransferase, bacterial (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=2 Tax=Ruminococcus RepID=C6J9A6_9FIRM
L1_007_365G1_scaffold_12_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3437..4069
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78050.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_12_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4177..5103)
DNA (927bp) protein (309aa)
Sporulation integral membrane protein YlbJ n=2 Tax=Ruminococcus RepID=C6J9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76737.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
nucleoside recognition domain-containing protein
L1_007_365G1_scaffold_12_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5273..6724
DNA (1452bp) protein (484aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=2 Tax=Ruminococcus RepID=C6J9A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76738.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_12_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7075..7887
DNA (813bp) protein (271aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78053.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_12_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7990..9945
DNA (1956bp) protein (652aa)
UPF0313 protein RSAG_00011 n=2 Tax=Ruminococcus RepID=C6J9B1_9FIRM
UPF0313 protein RSAG_00011 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Fe-S oxidoreductase
L1_007_365G1_scaffold_12_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9942..10595
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78055.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_12_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10677..11702
DNA (1026bp) protein (342aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CEY9_9FIRM
L1_007_365G1_scaffold_12_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11662..12186
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Ruminococcus RepID=C6J9B4_9FIRM
L1_007_365G1_scaffold_12_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12212..12745
DNA (534bp) protein (178aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Holliday junction resolvase RecU n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9B5_9FIRM
Penicillin-binding protein-related factor A, putative recombinase
L1_007_365G1_scaffold_12_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13572..14690
DNA (1119bp) protein (373aa)
ATP phosphoribosyltransferase regulatory subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ65_9FIRM
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_12_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14694..15341
DNA (648bp) protein (216aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J9B7_9FIRM
L1_007_365G1_scaffold_12_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15344..16648
DNA (1305bp) protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=2 Tax=Ruminococcus RepID=C6J9B8_9FIRM
L1_007_365G1_scaffold_12_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16756..17343
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Ruminococcus RepID=C6J9B9_9FIRM
L1_007_365G1_scaffold_12_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17401..17754
DNA (354bp) protein (118aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31 3.5.4.19 4.1.3.-)
Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Ruminococcus RepID=C6J9C0_9FIRM
L1_007_365G1_scaffold_12_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18324..19736
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78036.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
L1_007_365G1_scaffold_12_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20061..21080
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78038.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_12_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21105..22298
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78040.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
periplasmic binding protein
L1_007_365G1_scaffold_12_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22438..23457
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78067.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transporter permease
L1_007_365G1_scaffold_12_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23537..24694
DNA (1158bp) protein (386aa)
iron ABC transporter ATPase (EC:3.6.3.34)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78044.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_12_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24860..25579
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C6_9FIRM
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDD78046.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_12_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25878..26141
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78047.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_12_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26220..27842
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J9C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78071.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Leucine-rich repeat (LRR) protein
L1_007_365G1_scaffold_12_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28106..29947
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJ24_9FIRM
Displaying items 1-30 of 475 in total

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