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L1_007_365G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 185 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_48_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..151
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ERX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95801.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_48_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

160..297
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2ERX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95801.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_48_3
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

392..610
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DHH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95803.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_48_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

688..1053
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CZ46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95804.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_007_365G1_scaffold_48_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1306..3723
DNA (2418bp) protein (806aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIK0_9FIRM
L1_007_365G1_scaffold_48_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3855..4601
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78823.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4605..5372)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78822.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5369..6277)
DNA (909bp) protein (303aa)
Transcriptional regulator LysR family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5U0_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCZ78821.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, LysR family
L1_007_365G1_scaffold_48_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6414..7676
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL97_9FIRM
L1_007_365G1_scaffold_48_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7710..8198
DNA (489bp) protein (163aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5USY2_9FIRM
leuD; 3-isopropylmalate dehydratase small subunit
L1_007_365G1_scaffold_48_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8225..9025)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78818.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9156..10646
DNA (1491bp) protein (497aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDG1_9FIRM
Threonine synthase {ECO:0000313|EMBL:CCZ78817.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_48_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10674..11468
DNA (795bp) protein (265aa)
Polar amino acid ABC transporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5T5_9FIRM
Polar amino acid ABC transporter {ECO:0000313|EMBL:CCZ78816.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_48_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11489..12175
DNA (687bp) protein (229aa)
Amine acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL91_9FIRM
Amine acid ABC transporter permease protein 3-TM region His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:CCZ78815.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
amino acid ABC transporter permease
L1_007_365G1_scaffold_48_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12165..12908
DNA (744bp) protein (248aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Polar amino acid ABC transporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5USX5_9FIRM
Polar amino acid ABC transporter {ECO:0000313|EMBL:CCZ78814.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_48_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12981..13877)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78813.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13883..14260)
DNA (378bp) protein (126aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDF6_9FIRM
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:CCZ78812.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_365G1_scaffold_48_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14394..14738
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78811.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15206..16927
DNA (1722bp) protein (574aa)
SpoIID/LytB domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL86_9FIRM
SpoIID/LytB domain {ECO:0000313|EMBL:CCZ78810.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sporulation protein SpoIID
L1_007_365G1_scaffold_48_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17301..18320
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5USX0_9FIRM
L1_007_365G1_scaffold_48_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18334..20751
DNA (2418bp) protein (806aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKI2_9FIRM
L1_007_365G1_scaffold_48_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20754..21791
DNA (1038bp) protein (346aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDF1_9FIRM
L1_007_365G1_scaffold_48_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22096..22659
DNA (564bp) protein (188aa)
BioY protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5S7_9FIRM
BioY protein {ECO:0000313|EMBL:CCZ78806.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22789..23127
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78805.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
PilZ domain.
L1_007_365G1_scaffold_48_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23146..24432
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5USW3_9FIRM
3-phosphoshikimate 1-carboxyvinyltransferase
L1_007_365G1_scaffold_48_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24493..25590)
DNA (1098bp) protein (366aa)
Prephenate dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKH7_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:CCZ78803.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
prephenate dehydrogenase
L1_007_365G1_scaffold_48_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25742..27634
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78802.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter-like protein
L1_007_365G1_scaffold_48_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27713..29800
DNA (2088bp) protein (696aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Elongation factor G n=1 Tax=Roseburia sp. CAG:18 RepID=R5V5S2_9FIRM
Elongation factor G {ECO:0000313|EMBL:CCZ78801.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_48_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29781..31124
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78800.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_48_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31081..31368)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5USV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78799.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 185 in total

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