ggKbase home page

L1_007_365G1_scaffold_55

Search features with annotation key words

Displaying items 61-90 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_55_61
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63729..64670
DNA (942bp) protein (314aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
protein-(glutamine-N5) methyltransferase (EC:2.1.1.72)
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6C7_9CLOT
L1_007_365G1_scaffold_55_62
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

64703..65776
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=3 Tax=Clostridium bolteae RepID=A8RY06_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
peptide chain release factor 1
L1_007_365G1_scaffold_55_63
unknown

Not on your lists

65815..65937
DNA (123bp) protein (41aa)

This feature has no annotations

L1_007_365G1_scaffold_55_64
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65937..66263
DNA (327bp) protein (109aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQF4_9CLOT
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:CCY44443.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Fe2+/Zn2+ uptake regulation proteins
L1_007_365G1_scaffold_55_65
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66346..66555
DNA (210bp) protein (70aa)
FeoA domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQL3_9CLOT
FeoA domain protein {ECO:0000313|EMBL:CCY44430.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Fe2+ transport system protein A
L1_007_365G1_scaffold_55_66
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66633..66851
DNA (219bp) protein (73aa)
Fe2+ transport system protein A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVR4_9CLOT
Fe2+ transport system protein A {ECO:0000313|EMBL:CCY44429.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Fe2+ transport system protein A
L1_007_365G1_scaffold_55_67
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66891..69074
DNA (2184bp) protein (728aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQD9_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CCY44428.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ferrous iron transporter FeoB
L1_007_365G1_scaffold_55_68
unknown

Not on your lists

69204..69392
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_365G1_scaffold_55_69
unknown

Not on your lists

69389..69547
DNA (159bp) protein (53aa)

This feature has no annotations

L1_007_365G1_scaffold_55_70
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69544..69909
DNA (366bp) protein (122aa)
Heavy-metal-associated domain-containing protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQK7_9CLOT
Heavy-metal-associated domain-containing protein {ECO:0000313|EMBL:CCY44425.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Copper chaperone
L1_007_365G1_scaffold_55_71
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70142..70915)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNW6_9CLOT
Transcriptional regulator KdgR {ECO:0000313|EMBL:KJJ68409.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
transcriptional regulator, IclR family
L1_007_365G1_scaffold_55_72
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71164..72126
DNA (963bp) protein (321aa)
Putative 2-keto-3-deoxygluconate transporter n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF77_9FIRM
Putative 2-keto-3-deoxygluconate transporter {ECO:0000313|EMBL:EEQ58724.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
2-keto-3-deoxygluconate permease
L1_007_365G1_scaffold_55_73
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72142..72435
DNA (294bp) protein (98aa)
SAF domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF76_9FIRM
SAF domain protein {ECO:0000313|EMBL:EEQ58723.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative N-terminus region of carbohydratehydrolase, SAF domain
L1_007_365G1_scaffold_55_74
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72451..73632
DNA (1182bp) protein (394aa)
D-galactarate dehydratase/altronate hydrolase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF75_9FIRM
D-galactarate dehydratase/altronate hydrolase domain protein {ECO:0000313|EMBL:EEQ58722.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
carbohydrate hydrolase
L1_007_365G1_scaffold_55_75
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73684..74574
DNA (891bp) protein (297aa)
FAH family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EF74_9FIRM
FAH family protein {ECO:0000313|EMBL:EEQ58721.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
fumarylacetoacetate (FAA) hydrolase family protein
L1_007_365G1_scaffold_55_76
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74598..75512
DNA (915bp) protein (305aa)
Putative 2-keto-3-deoxy-galactonate aldolase YagE {ECO:0000313|EMBL:KJJ68408.1}; EC=4.1.2.- {ECO:0000313|EMBL:KJJ68408.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
dapA2; dihydrodipicolinate synthase (EC:4.3.3.7)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNW5_9CLOT
L1_007_365G1_scaffold_55_77
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75622..76923)
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4R9_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EOQ39863.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP dicarboxylate transporter subunit DctM
L1_007_365G1_scaffold_55_78
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76928..77425)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W583_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39864.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L1_007_365G1_scaffold_55_79
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77440..78474)
DNA (1035bp) protein (345aa)
DctP family TRAP transporter solute receptor n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4L0_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:EOQ39865.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP dicarboxylate transporter subunit DctP
L1_007_365G1_scaffold_55_80
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78745..80652
DNA (1908bp) protein (636aa)
Transcriptional antiterminator n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DMA9_CLOSC
Transcriptional antiterminator
Transcriptional antiterminator {ECO:0000313|EMBL:CBK78833.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_81
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80631..81287
DNA (657bp) protein (219aa)
RDD family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDI7_CLOSC
RDD family.
RDD family {ECO:0000313|EMBL:CBK78834.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_82
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81393..81716
DNA (324bp) protein (108aa)
Phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system cellobiose-specific component IIA {ECO:0000313|EMBL:CBK78835.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK78835.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphotransferase system cellobiose-specific component IIA n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDI8_CLOSC
L1_007_365G1_scaffold_55_83
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81752..82072
DNA (321bp) protein (107aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
Phosphotransferase system cellobiose-specific component IIB {ECO:0000313|EMBL:CBK78836.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBK78836.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphotransferase system cellobiose-specific component IIB n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDI9_CLOSC
L1_007_365G1_scaffold_55_84
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

82088..83455
DNA (1368bp) protein (456aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ0_CLOSC
PTS system, lactose/cellobiose family IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_85
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

83470..83991
DNA (522bp) protein (174aa)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB). (EC:1.21.4.2)
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) {ECO:0000313|EMBL:CBK78838.1}; EC=1.21.4.2 {ECO:0000313|EMBL:CBK78838.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ1_CLOSC
L1_007_365G1_scaffold_55_86
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

84161..85117
DNA (957bp) protein (319aa)
glycosylasparaginase precursor. Threonine peptidase. MEROPS family T02 (EC:3.5.1.26 3.5.1.1)
Glycosylasparaginase. Threonine peptidase. MEROPS family T02 {ECO:0000313|EMBL:CBK78839.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBK78839.1};; EC=3.5.1.26 {ECO:0000313|EMBL:CBK78839.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Glycosylasparaginase. Threonine peptidase. MEROPS family T02 n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ2_CLOSC
L1_007_365G1_scaffold_55_87
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85132..86253
DNA (1122bp) protein (374aa)
Dipeptidase, putative n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ3_CLOSC
dipeptidase, putative
Dipeptidase, putative {ECO:0000313|EMBL:CBK78840.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_88
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86250..86981
DNA (732bp) protein (244aa)
Uncharacterized protein involved in copper resistance n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ4_CLOSC
Uncharacterized protein involved in copper resistance
Uncharacterized protein involved in copper resistance {ECO:0000313|EMBL:CBK78841.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_89
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86981..87844
DNA (864bp) protein (288aa)
Uncharacterized conserved protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ5_CLOSC
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK78842.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_007_365G1_scaffold_55_90
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87886..88977
DNA (1092bp) protein (364aa)
Uncharacterized conserved protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DDJ6_CLOSC
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK78843.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Displaying items 61-90 of 160 in total

View Taxonomy