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L1_007_365G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_55_1
unknown

Not on your lists

106..339
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_365G1_scaffold_55_2
unknown

Not on your lists

1215..2033
DNA (819bp) protein (273aa)

This feature has no annotations

L1_007_365G1_scaffold_55_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2113..2964
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZN00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44749.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cysteine-rich secretory protein family./Putative cell wall binding repeat.
L1_007_365G1_scaffold_55_4
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3220..3879
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HRF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO17988.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
L1_007_365G1_scaffold_55_5
unknown

Not on your lists

4075..4230
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_365G1_scaffold_55_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4578..7883
DNA (3306bp) protein (1102aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DH89_CLOSC
L1_007_365G1_scaffold_55_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8014..8682)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42448.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
copper amine oxidase-like domain-containing protein
L1_007_365G1_scaffold_55_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8675..9358)
DNA (684bp) protein (228aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2V0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY94082.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
RNA polymerase sigma factor sigma-70 family protein
L1_007_365G1_scaffold_55_9

Not on your lists

comp(9401..9994)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SXA7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59964.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_365G1_scaffold_55_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10117..10761)
DNA (645bp) protein (215aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUS2_9CLOT
pyroglutamyl-peptidase I
L1_007_365G1_scaffold_55_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10905..11837)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44073.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_55_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11839..12534)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J595_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44072.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_55_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12771..14441
DNA (1671bp) protein (557aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9XEL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13665.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type dipeptide transport system, periplasmic component
L1_007_365G1_scaffold_55_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14521..15522
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62808.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L1_007_365G1_scaffold_55_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15509..16567
DNA (1059bp) protein (353aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET17_9FIRM
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:EEQ61161.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptide ABC transporter substrate-binding protein
L1_007_365G1_scaffold_55_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16564..17511
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RXW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14423.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_55_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17526..18440
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98835.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_55_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18734..19051
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44071.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_55_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19172..19594
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 IPR6_9CLOT">RepID=R5IPR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44070.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_55_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19616..20377
DNA (762bp) protein (254aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUR7_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20426..20707
DNA (282bp) protein (94aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI6_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20750..21256
DNA (507bp) protein (169aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium sp. CAG:7 RepID=R5J590_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21253..21792
DNA (540bp) protein (180aa)
ATP synthase F1 subcomplex delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4X3_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21807..23327
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium sp. CAG:7 IPR1_9CLOT">RepID=R5IPR1_9CLOT
L1_007_365G1_scaffold_55_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23349..24206
DNA (858bp) protein (286aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUR4_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24304..25701
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI3_9CLOT
L1_007_365G1_scaffold_55_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25720..26130
DNA (411bp) protein (137aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5J585_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_55_28
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26287..27432
DNA (1146bp) protein (382aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHG9_9CLOT
Sua5/YciO/YrdC/YwlC family protein
L1_007_365G1_scaffold_55_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27589..31515)
DNA (3927bp) protein (1309aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XEE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98072.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L1_007_365G1_scaffold_55_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31792..32331
DNA (540bp) protein (180aa)
Multimeric flavodoxin WrbA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5J4_9FIRM
Multimeric flavodoxin WrbA
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CBL02853.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 160 in total

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