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L1_007_365G1_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_60_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..97
DNA (96bp) protein (32aa)
Acyl carrier protein n=17 Tax=Bacteroides RepID=D6CZU9_9BACE
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L1_007_365G1_scaffold_60_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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113..1375
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447, ECO:0000313|EMBL:CBK67700.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Bacteroides xylanisolvens RepID=D6CZU8_9BACE
L1_007_365G1_scaffold_60_3
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1341..2408
DNA (1068bp) protein (356aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Bacteroides sp. D1 RepID=C3Q979_9BACE
L1_007_365G1_scaffold_60_4
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2350..3360)
DNA (1011bp) protein (337aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:EEZ05481.1}; EC=2.7.1.11 {ECO:0000313|EMBL:EEZ05481.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
6-phosphofructokinase n=6 Tax=Bacteroides RepID=D6CZU6_9BACE
L1_007_365G1_scaffold_60_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3511..4944
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9URG0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85296.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
GH3 auxin-responsive promoter.
L1_007_365G1_scaffold_60_6
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5185..6324)
DNA (1140bp) protein (380aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
tRNA-specific 2-thiouridylase MnmA n=6 Tax=Bacteroides RepID=D6CZU4_9BACE
L1_007_365G1_scaffold_60_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6378..9218
DNA (2841bp) protein (947aa)
Superfamily II DNA/RNA helicases, SNF2 family n=3 Tax=Bacteroides RepID=D6CZU3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85294.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Superfamily II DNA/RNA helicases, SNF2 family
L1_007_365G1_scaffold_60_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9364..9774
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9URY0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85293.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L1_007_365G1_scaffold_60_9
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9796..11970
DNA (2175bp) protein (725aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9URY0_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY85293.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L1_007_365G1_scaffold_60_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11992..13989
DNA (1998bp) protein (666aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3Q985_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CBK67693.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
hypothetical protein
L1_007_365G1_scaffold_60_11
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14323..15135
DNA (813bp) protein (271aa)
HAD-superfamily hydrolase, subfamily IIB n=6 Tax=Bacteroides RepID=D6CZU0_9BACE
HAD-superfamily hydrolase, subfamily IIB
Cof-like hydrolase {ECO:0000313|EMBL:EEO48520.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L1_007_365G1_scaffold_60_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15366..16847
DNA (1482bp) protein (494aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M2P1_9BACE
L1_007_365G1_scaffold_60_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16988..19849)
DNA (2862bp) protein (954aa)
Chondroitin sulfate ABC lyase n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JF26_9BACE
Chondroitin sulfate ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC eliminase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitinase ABC {ECO:0000256|PIRNR:PIRNR034515}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Polysaccharide lyase family 8, C-terminal beta-sandwich domain./Lyase, catalytic./Polysaccharide lyase family 8, super-sandwich domain./Lyase, N terminal.
L1_007_365G1_scaffold_60_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19963..21513)
DNA (1551bp) protein (517aa)
Arylsulfatase A and related enzymes n=9 Tax=Bacteroides RepID=D6CZT7_9BACE
Arylsulfatase A and related enzymes
Uncharacterized protein {ECO:0000313|EMBL:EGM97887.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L1_007_365G1_scaffold_60_15
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21679..22881)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CA23_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31522.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Highly conserved protein containing a thioredoxin domain
L1_007_365G1_scaffold_60_16
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23343..23912
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor, expansion family 1 n=4 Tax=Bacteroides RepID=E5CA24_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY85286.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
RNA polymerase sigma70 factor
L1_007_365G1_scaffold_60_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24183..24281
DNA (99bp) protein (33aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I0PYL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97890.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L1_007_365G1_scaffold_60_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24350..25849
DNA (1500bp) protein (500aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CA25_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY70265.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
cell surface receptor IPT/TIG domain protein
L1_007_365G1_scaffold_60_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26014..26958
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IAZ5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY70264.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
anti-sigma factor
L1_007_365G1_scaffold_60_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27109..30669
DNA (3561bp) protein (1187aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LI52_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM97893.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
SusC/RagA family TonB-linked outer membrane protein
L1_007_365G1_scaffold_60_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30684..32450
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UTJ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85923.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
RagB/SusD family protein
L1_007_365G1_scaffold_60_22
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32612..33511
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CA29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31528.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
hypothetical protein
L1_007_365G1_scaffold_60_23
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33740..35605
DNA (1866bp) protein (622aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8Z4A1_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY85921.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L1_007_365G1_scaffold_60_24
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35621..36358
DNA (738bp) protein (246aa)
Alpha-galactosidase (EC:3.2.1.22)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E5CA31_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY85920.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L1_007_365G1_scaffold_60_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36470..39748
DNA (3279bp) protein (1093aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LI57_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM97898.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
glycosyl hydrolases family 2,F5/8 type C domain-containing protein
L1_007_365G1_scaffold_60_26
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39932..41740)
DNA (1809bp) protein (603aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QVP0_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEO56024.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Beta-galactosidase/beta-glucuronidase
L1_007_365G1_scaffold_60_27
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41780..42856)
DNA (1077bp) protein (359aa)
Calcineurin-like phosphoesterase n=5 Tax=Bacteroides RepID=D6CZT4_9BACE
Calcineurin-like phosphoesterase.
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EFI14861.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L1_007_365G1_scaffold_60_28
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42860..43945)
DNA (1086bp) protein (362aa)
Beta-xylosidase (EC:3.2.1.99)
Beta-xylosidase n=10 Tax=Bacteroides RepID=D6CZT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07004.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L1_007_365G1_scaffold_60_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43972..45801)
DNA (1830bp) protein (610aa)
Putative uncharacterized protein n=1 Tax=Bacteroides ovatus 3_8_47FAA RepID=F7LI61_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGM97902.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
SusD family.
L1_007_365G1_scaffold_60_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45825..49325)
DNA (3501bp) protein (1167aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TM53_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY70253.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
TonB-dependent Receptor Plug Domain./TonB dependent receptor.
Displaying items 1-30 of 194 in total

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