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L1_007_365G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_61_1
unknown

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comp(2..466)
DNA (465bp) protein (155aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T3Q7R7_CLODI
L1_007_365G1_scaffold_61_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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637..840
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08319.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
putative site-specific recombinase
L1_007_365G1_scaffold_61_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1145..2500
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU95038.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_61_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2698..4911
DNA (2214bp) protein (738aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ3_9FIRM
L1_007_365G1_scaffold_61_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5098..6123
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ2_9FIRM
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EEU95036.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Actin-like ATPase involved in cell morphogenesis
L1_007_365G1_scaffold_61_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6289..6645
DNA (357bp) protein (119aa)
Sodium pump decarboxylase, gamma subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAQ1_9FIRM
Sodium pump decarboxylase, gamma subunit {ECO:0000313|EMBL:EEU95035.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Oxaloacetate decarboxylase, gamma chain.
L1_007_365G1_scaffold_61_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6661..7869
DNA (1209bp) protein (403aa)
glutaconyl-CoA decarboxylase beta subunit (EC:4.1.1.70 4.1.1.3)
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI32_9FIRM
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EFQ07149.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_61_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7992..10640
DNA (2649bp) protein (883aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZT9_9FIRM
L1_007_365G1_scaffold_61_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10648..11427
DNA (780bp) protein (260aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
thymidylate synthase (FAD) (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAP6_9FIRM
L1_007_365G1_scaffold_61_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11424..12092
DNA (669bp) protein (223aa)
thymidylate kinase (EC:2.7.4.9)
dTMP kinase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAP5_9FIRM
dTMP kinase {ECO:0000313|EMBL:EEU95029.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_61_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12116..12928
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95028.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_61_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12942..14072
DNA (1131bp) protein (377aa)
YceG family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAP3_9FIRM
YceG family protein {ECO:0000313|EMBL:EEU95027.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted periplasmic solute-binding protein
L1_007_365G1_scaffold_61_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14216..15451
DNA (1236bp) protein (412aa)
Peptidase, U32 family {ECO:0000313|EMBL:EEU95026.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEU95026.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAP2_9FIRM
L1_007_365G1_scaffold_61_14
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15806..17485)
DNA (1680bp) protein (560aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PA30_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDC20350.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_365G1_scaffold_61_15
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17589..17810)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BW29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68323.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L1_007_365G1_scaffold_61_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(17773..18753)
DNA (981bp) protein (327aa)
Plasmid recombination enzyme n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5Y6_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CCZ35988.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Plasmid recombination enzyme.
L1_007_365G1_scaffold_61_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18753..18974)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_61_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(19438..20757)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LM99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86980.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
phage/plasmid primase, P4 family, C-terminal domain
L1_007_365G1_scaffold_61_19
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20738..21355)
DNA (618bp) protein (206aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCN7_CLOS4
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERJ00600.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
DNA primase
L1_007_365G1_scaffold_61_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21608..22720
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KK46_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEV01029.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_007_365G1_scaffold_61_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22818..23687
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62648.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Co/Zn/Cd cation transporter
L1_007_365G1_scaffold_61_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23722..24948
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37043.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_61_23
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25406..26740)
DNA (1335bp) protein (445aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1K4_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY66937.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_61_24
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(26733..27299)
DNA (567bp) protein (189aa)
putative acetyltransferase (EC:2.3.1.-)
Putative GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TXZ5_9FIRM
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDC72786.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L1_007_365G1_scaffold_61_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27383..28774)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=3 Tax=Clostridium sp. 7_3_54FAA RepID=G5FKG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03094.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative recombinase
L1_007_365G1_scaffold_61_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29412..29660)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YL23_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO35101.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_61_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29672..31318)
DNA (1647bp) protein (549aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBK99261.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK99261.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ12_9FIRM
L1_007_365G1_scaffold_61_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31347..32210)
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H6U8_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU96423.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AraC-type DNA-binding domain-containing proteins
L1_007_365G1_scaffold_61_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32435..33727
DNA (1293bp) protein (431aa)
Galactokinase (EC:2.7.1.6)
GHMP kinase, N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H6U7_9FIRM
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EEU96422.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_61_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33899..34342
DNA (444bp) protein (148aa)
Transposase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K543_9FIRM
Transposase.
Transposase {ECO:0000313|EMBL:CBK98636.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 150 in total

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