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L1_007_365G1_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_103_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..3564)
DNA (3564bp) protein (1188aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75733.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_103_2
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3834..4427)
DNA (594bp) protein (198aa)
translation initiation factor 2 n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B45623
Uncharacterized protein {ECO:0000313|EMBL:ETP71269.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L1_007_365G1_scaffold_103_3
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4434..4889)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B40B42
Uncharacterized protein {ECO:0000313|EMBL:EMZ20461.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_365G1_scaffold_103_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5043..7505)
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPK1_9FIRM
L1_007_365G1_scaffold_103_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7886..11041)
DNA (3156bp) protein (1052aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU1_9FIRM
L1_007_365G1_scaffold_103_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11704..12939
DNA (1236bp) protein (412aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75747.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_103_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12910..13869)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75748.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
L1_007_365G1_scaffold_103_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13930..15054)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75749.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized Fe-S center protein
L1_007_365G1_scaffold_103_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15144..15389)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75750.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_103_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15623..17305)
DNA (1683bp) protein (561aa)
Phosphomannomutase (EC:5.4.2.8)
phosphoglucomutase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031D6ABE
Uncharacterized protein {ECO:0000313|EMBL:EES75751.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_103_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17422..18309)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75752.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_103_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18306..19310)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGU9_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD75899.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_103_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19310..20221)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75754.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_007_365G1_scaffold_103_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20214..21227)
DNA (1014bp) protein (338aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGV1_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES75755.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_007_365G1_scaffold_103_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21297..22838)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGV2_9FIRM
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDD76595.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide transport system, periplasmic component
L1_007_365G1_scaffold_103_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23113..23592)
DNA (480bp) protein (160aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Ruminococcus RepID=C6JGV3_9FIRM
L1_007_365G1_scaffold_103_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23756..25012)
DNA (1257bp) protein (419aa)
Site-specific recombinase XerD n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRF3_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK95672.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25027..25266)
DNA (240bp) protein (80aa)
DNA binding domain, excisionase family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRF2_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK95671.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25277..25513)
DNA (237bp) protein (79aa)
DNA binding domain, excisionase family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRF1_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK95670.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25529..25750)
DNA (222bp) protein (74aa)
DNA binding domain, excisionase family n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRF0_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK95669.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_21

Not on your lists

comp(25848..26069)
DNA (222bp) protein (74aa)
Excisionase from transposon n=1 Tax=human gut metagenome RepID=K1TR53_9ZZZZ
Excisionase from transposon {ECO:0000313|EMBL:EKC75542.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Excisionase from transposon Tn916.
L1_007_365G1_scaffold_103_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26072..26623)
DNA (552bp) protein (184aa)
Growth inhibitor n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRE8_9FIRM
Growth inhibitor
Growth inhibitor {ECO:0000313|EMBL:CBK95667.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_23
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26733..27317)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I2X9_9CLOT
Chromatin SPT2
Chromatin SPT2 {ECO:0000313|EMBL:ADE30934.1}; TaxID=423211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis (strain GZ1).;"
L1_007_365G1_scaffold_103_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27804..28370)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRE7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95666.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_25

Not on your lists

28584..28988
DNA (405bp) protein (135aa)
XRE family transcriptional regulator n=1 Tax=human gut metagenome RepID=K1URT4_9ZZZZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EKC74191.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Helix-turn-helix.
L1_007_365G1_scaffold_103_26

Not on your lists

28995..29579
DNA (585bp) protein (195aa)
Zn peptidase n=1 Tax=human gut metagenome RepID=K1U7C7_9ZZZZ
Zn peptidase {ECO:0000313|EMBL:EKC74190.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted Zn peptidase
L1_007_365G1_scaffold_103_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29599..30609
DNA (1011bp) protein (337aa)
Uncharacterized conserved protein n=2 Tax=root RepID=D4JRE4_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK95663.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_28

Not on your lists

comp(30908..31384)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1T544_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC68127.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_365G1_scaffold_103_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31389..31676)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JRE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95662.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_365G1_scaffold_103_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31682..32452)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRE2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95661.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying items 1-30 of 135 in total

View Taxonomy