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L1_007_365G1_scaffold_105

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Displaying items 1-30 of 122 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_105_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..540)
DNA (540bp) protein (180aa)
Response regulator receiver domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FKJ8_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83393.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
regulatory protein VanR
L1_007_365G1_scaffold_105_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(749..952)
DNA (204bp) protein (68aa)
Peptidase S24-like protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNJ6_9FIRM
Peptidase S24-like protein {ECO:0000313|EMBL:EFQ05240.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_105_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1406..1645
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=root RepID=A8SEK3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98463.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_105_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1645..2352
DNA (708bp) protein (236aa)
Predicted Zn peptidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4L9_9FIRM
Predicted Zn peptidase
Predicted Zn peptidase {ECO:0000313|EMBL:CBK98462.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_105_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2879..3166
DNA (288bp) protein (96aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEK1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP20770.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Helix-turn-helix.
L1_007_365G1_scaffold_105_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4154..4882
DNA (729bp) protein (243aa)
Toxin-antitoxin system, toxin component, MazF family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEJ9_9FIRM
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:EDP20768.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_105_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4879..5664
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05247.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_365G1_scaffold_105_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5695..5940
DNA (246bp) protein (82aa)
DNA binding domain, excisionase family n=3 Tax=Faecalibacterium prausnitzii RepID=D4K7K7_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFQ05248.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_105_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6031..6921
DNA (891bp) protein (297aa)
DNA binding domain, excisionase family n=3 Tax=Faecalibacterium prausnitzii RepID=A8SEJ6_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFQ05249.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
DNA binding domain, excisionase family
L1_007_365G1_scaffold_105_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6921..8312
DNA (1392bp) protein (464aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNK6_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ05250.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_105_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8369..8773)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K247_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00346.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_105_12
unknown

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9208..9765
DNA (558bp) protein (186aa)

This feature has no annotations

L1_007_365G1_scaffold_105_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9589..11214)
DNA (1626bp) protein (542aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDP20679.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDP20679.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHU8_9FIRM
L1_007_365G1_scaffold_105_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11233..12648)
DNA (1416bp) protein (472aa)
PTS system trehalose-specific IIBC component {ECO:0000313|EMBL:EDP20677.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDP20677.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
PTS system trehalose-specific IIBC component n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHU7_9FIRM
L1_007_365G1_scaffold_105_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12873..13595
DNA (723bp) protein (241aa)
Trehalose operon repressor n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHU5_9FIRM
Trehalose operon repressor {ECO:0000313|EMBL:EDP20676.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
transcriptional regulator, GntR family
L1_007_365G1_scaffold_105_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14286..16286
DNA (2001bp) protein (667aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H627_9FIRM
L1_007_365G1_scaffold_105_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16290..17249
DNA (960bp) protein (320aa)
Putative membrane protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H626_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEU96612.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
EamA-like transporter family.
L1_007_365G1_scaffold_105_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17251..18072
DNA (822bp) protein (274aa)
Mg-dependent DNase (EC:3.1.21.-)
Hydrolase, TatD family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H625_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:EEU96611.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_105_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18185..18418
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H624_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96610.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_105_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18495..18824)
DNA (330bp) protein (110aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJC3_9FIRM
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EFQ06721.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Plasmid stabilization system protein
L1_007_365G1_scaffold_105_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18781..19062)
DNA (282bp) protein (94aa)
Prevent-host-death family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDI3_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EDP20904.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
prevent-host-death family protein
L1_007_365G1_scaffold_105_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19132..19593)
DNA (462bp) protein (154aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H623_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU96609.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acetyltransferase (GNAT) family
L1_007_365G1_scaffold_105_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19672..20496)
DNA (825bp) protein (275aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H622_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU96608.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, ATPase component
L1_007_365G1_scaffold_105_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20498..21421)
DNA (924bp) protein (308aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H621_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU96607.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type uncharacterized transport system, permease component
L1_007_365G1_scaffold_105_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21439..22536)
DNA (1098bp) protein (366aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K101_9FIRM
ABC-type uncharacterized transport system, periplasmic component
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CBK99950.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_105_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23315..26059
DNA (2745bp) protein (915aa)
Helicase associated domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H616_9FIRM
Helicase associated domain protein {ECO:0000313|EMBL:EEU96602.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Helicase associated domain.
L1_007_365G1_scaffold_105_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26105..27256)
DNA (1152bp) protein (384aa)
Predicted oxidoreductases of the aldo/keto reductase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4S0_9FIRM
Predicted oxidoreductases of the aldo/keto reductase family
Predicted oxidoreductases of the aldo/keto reductase family {ECO:0000313|EMBL:CBK98513.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_105_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27438..28469
DNA (1032bp) protein (344aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
tRNA-dihydrouridine synthase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R863_9FIRM
tRNA-U20-dihydrouridine synthase
L1_007_365G1_scaffold_105_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28506..30884
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H612_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96598.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Bacterial membrane protein YfhO.
L1_007_365G1_scaffold_105_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30946..31119
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R6C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29902.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
Displaying items 1-30 of 122 in total

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