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L1_007_365G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_111_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1166)
DNA (1164bp) protein (388aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34825.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_111_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2329..3648)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YWH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34824.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_111_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3699..4607)
DNA (909bp) protein (303aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ribC; flavokinase/FAD synthetase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWH6_9FIRM
L1_007_365G1_scaffold_111_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4612..5430)
DNA (819bp) protein (273aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
truB; tRNA pseudouridine synthase (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWH7_9FIRM
L1_007_365G1_scaffold_111_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5580..6530)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34821.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L1_007_365G1_scaffold_111_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..6925)
DNA (390bp) protein (130aa)
Ribosome-binding factor A n=2 Tax=Clostridiales RepID=G9YWH9_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rbfA; ribosome-binding factor A
L1_007_365G1_scaffold_111_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6959..7369)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZ52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65345.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_111_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7910..10264)
DNA (2355bp) protein (785aa)
Translation initiation factor IF-2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWI3_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
infB; translation initiation factor IF-2
L1_007_365G1_scaffold_111_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10361..10882)
DNA (522bp) protein (174aa)
Ribosomal protein L7Ae n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57130.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_111_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10875..11147)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YWI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57129.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_111_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11380..11586)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B5V8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67610.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
nusA; putative transcription elongation protein NusA
L1_007_365G1_scaffold_111_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11694..12851)
DNA (1158bp) protein (386aa)
Transcription termination factor NusA n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWI6_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
nusA; transcription elongation protein NusA
L1_007_365G1_scaffold_111_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12936..13391)
DNA (456bp) protein (152aa)
Ribosome maturation factor RimP n=2 Tax=Clostridiales RepID=G9YWI7_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_111_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13649..14581
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34812.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPase
L1_007_365G1_scaffold_111_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14586..15596
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34811.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
L1_007_365G1_scaffold_111_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15593..17938
DNA (2346bp) protein (782aa)
Transglutaminase-like protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57122.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transglutaminase
L1_007_365G1_scaffold_111_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18189..20066)
DNA (1878bp) protein (626aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57121.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative esterase
L1_007_365G1_scaffold_111_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20204..20788)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57120.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L1_007_365G1_scaffold_111_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20785..21582)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34860.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
binding-protein-dependent transport systems inner membrane component
L1_007_365G1_scaffold_111_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21557..22636)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34859.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L1_007_365G1_scaffold_111_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22654..23313)
DNA (660bp) protein (220aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D1I6_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERI73401.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_365G1_scaffold_111_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23435..23740
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57116.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_365G1_scaffold_111_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23855..24901
DNA (1047bp) protein (349aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWK2_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EHM38835.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative LytR family regulatory protein
L1_007_365G1_scaffold_111_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24939..25799)
DNA (861bp) protein (287aa)
Prephenate dehydrogenase n=3 Tax=Clostridiales RepID=G9YPU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34855.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
prephenate dehydrogenase
L1_007_365G1_scaffold_111_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25830..26846)
DNA (1017bp) protein (339aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=3 Tax=Clostridiales RepID=G9YPU8_9FIRM
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EHO34854.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_111_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27149..27586
DNA (438bp) protein (146aa)
Rrf2 family protein n=3 Tax=Clostridiales RepID=H1C9D5_9FIRM
Rrf2 family protein {ECO:0000313|EMBL:EHO34853.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transcriptional regulator
L1_007_365G1_scaffold_111_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27651..30101)
DNA (2451bp) protein (817aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57111.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amidohydrolase 3
L1_007_365G1_scaffold_111_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30336..31040
DNA (705bp) protein (235aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridiales RepID=U2D1I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57110.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cAMP-binding protein
L1_007_365G1_scaffold_111_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31111..32025)
DNA (915bp) protein (305aa)
Cysteine synthase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ43_9FIRM
Cysteine synthase A {ECO:0000313|EMBL:EHM52038.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cysteine synthase A
L1_007_365G1_scaffold_111_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32149..33021)
DNA (873bp) protein (291aa)
Lipoprotein n=2 Tax=Clostridiales RepID=G9YQ44_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NLPA lipoprotein
Displaying items 1-30 of 117 in total

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