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L1_007_365G1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_116_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(700..1416)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EWQ6_9CLOT
Colicin V production protein {ECO:0000313|EMBL:ENZ09193.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
colicin V production protein
L1_007_365G1_scaffold_116_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1481..2308)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KRS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64817.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
cof family hydrolase
L1_007_365G1_scaffold_116_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2305..4818)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42144.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_116_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4842..5438)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW77_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Recombinational DNA repair protein (RecF pathway)
L1_007_365G1_scaffold_116_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5438..5794)
DNA (357bp) protein (119aa)
Nucleoid-associated protein BN757_02024 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJA0_9CLOT
Nucleoid-associated protein BN757_02024 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_116_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5869..7602)
DNA (1734bp) protein (578aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YBC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97155.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L1_007_365G1_scaffold_116_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7612..8691)
DNA (1080bp) protein (360aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ97_9CLOT
6-phosphofructokinase 2 {ECO:0000313|EMBL:CCY42135.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_116_8
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8895..10436)
DNA (1542bp) protein (514aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQJ5_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL40070.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_9
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10464..10817)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N7K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09399.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L1_007_365G1_scaffold_116_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11069..11293
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CET7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33027.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_116_11
unknown

Not on your lists

11293..11460
DNA (168bp) protein (56aa)
hypothetical protein
L1_007_365G1_scaffold_116_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11438..12007
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQJ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40073.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12044..12451
DNA (408bp) protein (136aa)
Archaeal holliday junction resolvase (Hjc) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQJ9_9FIRM
Archaeal holliday junction resolvase (hjc).
Archaeal holliday junction resolvase (Hjc) {ECO:0000313|EMBL:CBL40074.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12448..13836
DNA (1389bp) protein (463aa)
DNA or RNA helicases of superfamily II n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK0_9FIRM
DNA or RNA helicases of superfamily II
DNA or RNA helicases of superfamily II {ECO:0000313|EMBL:CBL40075.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13836..15701
DNA (1866bp) protein (622aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40077.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_16
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15715..16215
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK4_9FIRM
Protein of unknown function (DUF2829).
Uncharacterized protein {ECO:0000313|EMBL:CBL40079.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16229..16414
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80325.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_116_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16428..17180
DNA (753bp) protein (251aa)
ERF superfamily n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK5_9FIRM
ERF superfamily.
ERF superfamily {ECO:0000313|EMBL:CBL40080.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17183..17539
DNA (357bp) protein (119aa)
Protein of unknwon function (DUF3310) n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK6_9FIRM
Protein of unknwon function (DUF3310).
Protein of unknwon function (DUF3310) {ECO:0000313|EMBL:CBL40081.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_20
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17536..18588
DNA (1053bp) protein (351aa)
YqaJ-like viral recombinase domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK8_9FIRM
YqaJ-like viral recombinase domain.
YqaJ-like viral recombinase domain {ECO:0000313|EMBL:CBL40083.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_21
unknown

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18591..18719
DNA (129bp) protein (43aa)

This feature has no annotations

L1_007_365G1_scaffold_116_22
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18726..19514
DNA (789bp) protein (263aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Cytosine-specific methyltransferase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQK9_9FIRM
DNA-methyltransferase (dcm)
L1_007_365G1_scaffold_116_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19592..19840
DNA (249bp) protein (83aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YA81_9FIRM
L1_007_365G1_scaffold_116_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19854..20348
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CES1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33011.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_116_25
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20441..20977
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQL3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40088.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_26
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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20991..21374
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Atopobium minutum 10063974 RepID=N2BVN6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ42658.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L1_007_365G1_scaffold_116_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21389..21724
DNA (336bp) protein (112aa)
MazG nucleotide pyrophosphohydrolase domain n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQL6_9FIRM
MazG nucleotide pyrophosphohydrolase domain.
MazG nucleotide pyrophosphohydrolase domain {ECO:0000313|EMBL:CBL40091.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_116_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21724..22230
DNA (507bp) protein (169aa)
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.17.4.2 1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQL7_9FIRM
L1_007_365G1_scaffold_116_29
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22217..24343
DNA (2127bp) protein (709aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CBL40093.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CBL40093.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQL8_9FIRM
L1_007_365G1_scaffold_116_30
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24343..24777
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AUL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86031.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Displaying items 1-30 of 139 in total

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