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L1_007_365G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_122_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(375..1061)
DNA (687bp) protein (229aa)
DNA repair protein RadC n=6 Tax=Bacteroides RepID=A7UYT7_BACUN
DNA repair protein RadC {ECO:0000313|EMBL:EDO55985.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
DNA repair protein RadC
L1_007_365G1_scaffold_122_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1093..2082)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9U2Z0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY76591.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
glycosyl transferase 2
L1_007_365G1_scaffold_122_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2228..2794)
DNA (567bp) protein (189aa)
Elongation factor P n=7 Tax=Bacteroides RepID=A7UYT5_BACUN
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
translation elongation factor P (EF-P)
L1_007_365G1_scaffold_122_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2902..3150
DNA (249bp) protein (83aa)
Ribosomal protein L34 n=2 Tax=environmental samples RepID=R5C3D2_9BACE
Ribosomal protein L34 {ECO:0000256|RuleBase:RU000566}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
50S ribosomal protein L34
L1_007_365G1_scaffold_122_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3321..3968
DNA (648bp) protein (216aa)
PASTA domain protein n=2 Tax=Bacteroides RepID=A7UYT2_BACUN
PASTA domain protein {ECO:0000313|EMBL:EDO55980.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
PASTA domain containing protein
L1_007_365G1_scaffold_122_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4022..5092
DNA (1071bp) protein (357aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=2 Tax=Bacteroides RepID=A7UYT1_BACUN
L1_007_365G1_scaffold_122_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5089..6069
DNA (981bp) protein (327aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=3 Tax=Bacteroides uniformis RepID=A7UYT0_BACUN
L1_007_365G1_scaffold_122_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6082..7239
DNA (1158bp) protein (386aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7UYS9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA20695.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_007_365G1_scaffold_122_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7244..7912
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UYS8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO55976.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L1_007_365G1_scaffold_122_10
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7926..8312
DNA (387bp) protein (129aa)
Rhodanese-like protein n=2 Tax=Bacteroides RepID=A7UYS7_BACUN
Rhodanese-like domain-containing protein {ECO:0000313|EMBL:EFV27011.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Rhodanese domain protein
L1_007_365G1_scaffold_122_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8454..9407)
DNA (954bp) protein (318aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:KDS59020.1}; EC=2.1.3.9 {ECO:0000313|EMBL:KDS59020.1};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
N-acetylornithine carbamoyltransferase n=5 Tax=root RepID=A7UYS6_BACUN
putative ornithine carbamoyltransferase
L1_007_365G1_scaffold_122_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9452..10699)
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=2 Tax=Bacteroides uniformis RepID=A7UYS5_BACUN
L1_007_365G1_scaffold_122_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10766..11845)
DNA (1080bp) protein (360aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UYS4_BACUN
L1_007_365G1_scaffold_122_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11835..12074)
DNA (240bp) protein (80aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7UYS3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS59023.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L1_007_365G1_scaffold_122_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12150..12989)
DNA (840bp) protein (280aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UYS2_BACUN
L1_007_365G1_scaffold_122_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13099..13605)
DNA (507bp) protein (169aa)
Outer membrane protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UYS1_BACUN
Outer membrane protein {ECO:0000313|EMBL:EDO55969.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
outer membrane chaperone Skp
L1_007_365G1_scaffold_122_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13734..14249)
DNA (516bp) protein (172aa)
Outer membrane protein n=2 Tax=Bacteroides RepID=A7UYS0_BACUN
Outer membrane protein {ECO:0000313|EMBL:EDO55968.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
outer membrane chaperone Skp
L1_007_365G1_scaffold_122_18
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14291..16930)
DNA (2640bp) protein (880aa)
Outer membrane protein assembly complex, YaeT protein n=6 Tax=Bacteroides RepID=A7UYR9_BACUN
Outer membrane protein assembly complex YaeT protein {ECO:0000313|EMBL:CDE04116.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L1_007_365G1_scaffold_122_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16983..17717)
DNA (735bp) protein (245aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
UDP pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=7 Tax=Bacteroides RepID=A7UYR8_BACUN
L1_007_365G1_scaffold_122_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17723..19087)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20707.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_007_365G1_scaffold_122_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19222..20277)
DNA (1056bp) protein (352aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=4 Tax=Bacteroides RepID=D2EYH2_9BACE
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L1_007_365G1_scaffold_122_22
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20352..21188
DNA (837bp) protein (279aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Release factor glutamine methyltransferase n=1 Tax=Bacteroides sp. D20 RepID=D2EYH3_9BACE
protein-(glutamine-N5) methyltransferase, release factor-specific
L1_007_365G1_scaffold_122_23
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21185..21664
DNA (480bp) protein (160aa)
Regulatory protein RecX n=1 Tax=Bacteroides sp. D20 RepID=D2EYH4_9BACE
Regulatory protein RecX {ECO:0000313|EMBL:EFA20710.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
regulatory protein RecX
L1_007_365G1_scaffold_122_24
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21747..22385
DNA (639bp) protein (213aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=7 Tax=Bacteroides RepID=A7UYR3_BACUN
L1_007_365G1_scaffold_122_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22479..22889
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EYH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20712.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L1_007_365G1_scaffold_122_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22918..24258
DNA (1341bp) protein (447aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=2 Tax=Bacteroides RepID=D2EYH7_9BACE
L1_007_365G1_scaffold_122_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24783..26021)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9IC81_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10980.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L1_007_365G1_scaffold_122_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26253..27908)
DNA (1656bp) protein (552aa)
AMP-binding enzyme n=2 Tax=Bacteroides RepID=D2EYH9_9BACE
AMP-binding protein {ECO:0000313|EMBL:KDS59037.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative Acyl-CoA synthetase
L1_007_365G1_scaffold_122_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27916..28470)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I412_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10982.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transcriptional regulator
L1_007_365G1_scaffold_122_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28591..29364)
DNA (774bp) protein (258aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=3 Tax=Bacteroides RepID=D2EYI1_9BACE
Displaying items 1-30 of 97 in total

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