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L1_007_365G1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_126_1
unknown

Not on your lists

comp(227..835)
DNA (609bp) protein (203aa)

This feature has no annotations

L1_007_365G1_scaffold_126_2
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1051..1407)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKG3_9CLOT
SpoVA protein {ECO:0000313|EMBL:KJJ68801.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
SpoVA protein
L1_007_365G1_scaffold_126_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1410..2435)
DNA (1026bp) protein (342aa)
Stage V sporulation protein AD n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKG2_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:KJJ68802.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
stage V sporulation protein AD
L1_007_365G1_scaffold_126_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2566..2724)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47588.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf6
L1_007_365G1_scaffold_126_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2738..5509)
DNA (2772bp) protein (924aa)
mgtA; magnesium-transporting ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=3 Tax=Lachnospiraceae RepID=A7B310_RUMGN
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EGN49408.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_007_365G1_scaffold_126_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5727..6242)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47586.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
winged helix family two component response transcriptional regulator
L1_007_365G1_scaffold_126_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6258..8912)
DNA (2655bp) protein (885aa)
mgtA; magnesium-transporting ATPase (EC:3.6.3.2)
Magnesium-translocating P-type ATPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB57_9FIRM
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:EGJ47585.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L1_007_365G1_scaffold_126_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9151..12201)
DNA (3051bp) protein (1017aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J466_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43707.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Cation/multidrug efflux pump
L1_007_365G1_scaffold_126_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12205..13344)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43706.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RND family efflux transporter, MFP subunit
L1_007_365G1_scaffold_126_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13379..13996)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3C9_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG54143.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
tetR/AcrR family transcriptional regulator
L1_007_365G1_scaffold_126_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14135..14728)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43704.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulator
L1_007_365G1_scaffold_126_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14937..16424)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ING3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43703.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glutamate synthase NADH/NADPH small subunit
L1_007_365G1_scaffold_126_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16440..20981)
DNA (4542bp) protein (1514aa)
Ferredoxin-dependent glutamate synthase 1 {ECO:0000313|EMBL:KJJ69579.1}; EC=1.4.7.1 {ECO:0000313|EMBL:KJJ69579.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
glutamate synthase (ferredoxin) (EC:1.4.7.1)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HSB8_9CLOT
L1_007_365G1_scaffold_126_14
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21616..21924
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IQN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24229.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_007_365G1_scaffold_126_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21943..24504
DNA (2562bp) protein (854aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99834.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_365G1_scaffold_126_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24636..24902)
DNA (267bp) protein (89aa)
HPr family phosphocarrier n=16 Tax=Clostridium RepID=N9WU27_9CLOT
HPr family phosphocarrier {ECO:0000313|EMBL:ENZ08920.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS system phosphocarrier protein HPr
L1_007_365G1_scaffold_126_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25069..25713)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43694.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_126_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25897..27039)
DNA (1143bp) protein (381aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:7 RepID=R5INF4_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L1_007_365G1_scaffold_126_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27254..28165)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J450_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43692.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
diacylglycerol kinase catalytic subunit
L1_007_365G1_scaffold_126_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28162..29301)
DNA (1140bp) protein (380aa)
A/G-specific adenine glycosylase n=9 Tax=Clostridium RepID=N9WNJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25064.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
A/G-specific adenine glycosylase
L1_007_365G1_scaffold_126_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29294..30274)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INM5_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_126_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30291..30599)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43689.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_126_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30648..31637)
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=9 Tax=Clostridium RepID=G5I3K9_9CLOT
L1_007_365G1_scaffold_126_24
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31857..33227)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06805.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Na+/H+-dicarboxylate symporters
L1_007_365G1_scaffold_126_25
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33267..34022)
DNA (756bp) protein (252aa)
UPF0271 protein BN605_00282 n=1 Tax=Dorea sp. CAG:317 RepID=R6WIX4_9FIRM
UPF0271 protein BN605_00282 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L1_007_365G1_scaffold_126_26
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34061..35020)
DNA (960bp) protein (320aa)
Glycerate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MI42_9FIRM
Glycerate dehydrogenase {ECO:0000313|EMBL:EOS70346.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L1_007_365G1_scaffold_126_27
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35034..35999)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WBM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06800.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
biotin-dependent carboxylase uncharacterized domain
L1_007_365G1_scaffold_126_28
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35999..36760)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WIX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06799.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Allophanate hydrolase subunit 1
L1_007_365G1_scaffold_126_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36879..37787)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W6R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06798.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Transcriptional regulator
L1_007_365G1_scaffold_126_30
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37911..39200
DNA (1290bp) protein (430aa)
Aminotransferase, class V n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZP1_9CLOT
Aminotransferase, class V {ECO:0000313|EMBL:EEG74619.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
class V aminotransferase
Displaying items 1-30 of 105 in total

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