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L1_007_365G1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_143_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(343..1383)
-----------------
DNA (1041bp)
protein (347aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroidales RepID=C7XEI8_9PORP
anti-sigma factor
FecR family protein {ECO:0000313|EMBL:KDS63330.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L1_007_365G1_scaffold_143_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1449..2015)
-----------------
DNA (567bp)
protein (189aa)
RNA polymerase sigma-70 factor n=5 Tax=Bacteroidales RepID=C7XEI9_9PORP
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EFI07402.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_143_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2174..4159)
-----------------
DNA (1986bp)
protein (662aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate isomerase n=6 Tax=Bacteroidales RepID=A6L8K9_PARD8
Glucosamine-6-phosphate isomerase {ECO:0000313|EMBL:ABR42023.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_143_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4342..5508)
-----------------
DNA (1167bp)
protein (389aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
N-acetylglucosamine-6-phosphate deacetylase n=7 Tax=Bacteroidales RepID=A6L8K8_PARD8
N-acetylglucosamine-6-phosphate deacetylase
L1_007_365G1_scaffold_143_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5521..6726)
-----------------
DNA (1206bp)
protein (402aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
N-acetylglucosamine-6-phosphate deacetylase n=2 Tax=Parabacteroides RepID=K6AQM5_9PORP
N-acetylglucosamine-6-phosphate deacetylase
L1_007_365G1_scaffold_143_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7273..9222)
-----------------
DNA (1950bp)
protein (650aa)
ABC transporter, ATP-binding protein n=3 Tax=Parabacteroides RepID=C7XEJ3_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU49757.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ABC transporter ATP-binding protein
L1_007_365G1_scaffold_143_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9261..10226)
-----------------
DNA (966bp)
protein (322aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L8K5_PARD8
hypothetical protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EFI07397.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_143_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10353..11960)
-----------------
DNA (1608bp)
protein (536aa)
SusD family protein n=4 Tax=Parabacteroides RepID=C7XEJ5_9PORP
hypothetical protein
SusD family protein {ECO:0000313|EMBL:EEU49759.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L1_007_365G1_scaffold_143_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11991..15080)
-----------------
DNA (3090bp)
protein (1030aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZQJ2_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN18034.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L1_007_365G1_scaffold_143_10
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15600..16154
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L8K2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ83502.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L1_007_365G1_scaffold_143_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16259..19597
-----------------
DNA (3339bp)
protein (1113aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YUV3_9PORP
beta-galactosidase
L1_007_365G1_scaffold_143_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19722..20705)
-----------------
DNA (984bp)
protein (328aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A2T4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26030.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
thiol:disulfide interchange protein
L1_007_365G1_scaffold_143_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20726..21496)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A392_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN26029.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L1_007_365G1_scaffold_143_14
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21584..21766
-----------------
DNA (183bp)
protein (61aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BD91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47916.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L1_007_365G1_scaffold_143_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22069..23343)
-----------------
DNA (1275bp)
protein (425aa)
Outer membrane efflux protein n=2 Tax=Bacteroidales RepID=D7IVN0_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EFI07390.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
outer membrane efflux protein
L1_007_365G1_scaffold_143_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23372..26485)
-----------------
DNA (3114bp)
protein (1038aa)
CzcA family heavy metal efflux pump n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YUU7_9PORP
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKN18027.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
cation efflux system protein
L1_007_365G1_scaffold_143_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26492..27601)
-----------------
DNA (1110bp)
protein (370aa)
Cation efflux system protein n=3 Tax=Bacteroidales RepID=A6L8J5_PARD8
cation efflux system protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEY81999.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L1_007_365G1_scaffold_143_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27650..28009)
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1YR45_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI07387.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L1_007_365G1_scaffold_143_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28138..29685
-----------------
DNA (1548bp)
protein (516aa)
Peptidase, M28 family n=2 Tax=Bacteroidales RepID=D7IVM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN17980.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
aminopeptidase
L1_007_365G1_scaffold_143_20
unknown

Not on your lists

comp(29823..29927)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

L1_007_365G1_scaffold_143_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30165..31061)
-----------------
DNA (897bp)
protein (299aa)
Bifunctional protein FolD n=2 Tax=Bacteroidales RepID=D7IVM5_9BACE
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
L1_007_365G1_scaffold_143_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(31084..32421)
-----------------
DNA (1338bp)
protein (446aa)
Signal recognition particle protein n=8 Tax=Bacteroidales RepID=A6L8J1_PARD8
signal recognition protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_143_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32523..34433)
-----------------
DNA (1911bp)
protein (637aa)
Heavy metal translocating P-type ATPase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5YUQ1_9PORP
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKN17977.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
cation-transporting ATPase
L1_007_365G1_scaffold_143_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34523..34951)
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L8I9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42003.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L1_007_365G1_scaffold_143_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35050..36372)
-----------------
DNA (1323bp)
protein (441aa)
MATE efflux family protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6A346_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EKN17975.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
antiporter membrane protein
L1_007_365G1_scaffold_143_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36471..36821)
-----------------
DNA (351bp)
protein (117aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Aspartate 1-decarboxylase n=10 Tax=root RepID=PAND_PARD8
L1_007_365G1_scaffold_143_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36835..37674)
-----------------
DNA (840bp)
protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Pantothenate synthetase n=7 Tax=Bacteroidales RepID=PANC_PARD8
panC; pantoate--beta-alanine ligase
L1_007_365G1_scaffold_143_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37775..38599
-----------------
DNA (825bp)
protein (275aa)
Glycosyltransferase family 5 n=6 Tax=Bacteroidales RepID=A6L8I5_PARD8
glycosyl transferase family protein
Glycogen synthase (Starch [bacterial glycogen]synthase) {ECO:0000313|EMBL:EFI07378.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L1_007_365G1_scaffold_143_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38611..39987
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XEL4_9PORP
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EKN26014.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L1_007_365G1_scaffold_143_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40127..41419)
-----------------
DNA (1293bp)
protein (431aa)
Glycoside hydrolase family 57, candidate alpha-glycosidase n=9 Tax=Bacteroidales RepID=A6L8I3_PARD8
alpha-glycosidase
Glycosyl hydrolase, family 57 {ECO:0000313|EMBL:EEY82011.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Displaying items 1-30 of 105 in total

View Taxonomy