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L1_007_365G1_scaffold_156

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Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_156_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13..1929)
DNA (1917bp) protein (639aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ33_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHQ45307.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
diguanylate cyclase (GGDEF) domain-containing protein
L1_007_365G1_scaffold_156_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2012..3004)
DNA (993bp) protein (331aa)
Oxidoreductase, NAD-binding domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N253_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:CCZ33681.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative dehydrogenase
L1_007_365G1_scaffold_156_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3104..4438
DNA (1335bp) protein (445aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
tRNA modification GTPase MnmE n=5 Tax=Erysipelotrichaceae RepID=B0N254_9FIRM
trmE; tRNA modification GTPase TrmE
L1_007_365G1_scaffold_156_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4440..4667
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33683.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_156_5
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4676..5548
DNA (873bp) protein (291aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N256_9FIRM
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EDS19816.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
mechanosensitive ion channel MscS
L1_007_365G1_scaffold_156_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5511..6152
DNA (642bp) protein (214aa)
Hydrolase, NUDIX family n=4 Tax=Erysipelotrichaceae RepID=B0N257_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90835.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
NUDIX hydrolase
L1_007_365G1_scaffold_156_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6250..7062
DNA (813bp) protein (271aa)
Transcriptional regulator, RpiR family n=5 Tax=Erysipelotrichaceae RepID=B0N258_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ33687.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
transcriptional regulator
L1_007_365G1_scaffold_156_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7074..7385)
DNA (312bp) protein (104aa)
putative cellobiose phosphotransferase enzyme IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N259_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45314.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_365G1_scaffold_156_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7412..8806)
DNA (1395bp) protein (465aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=3 Tax=Erysipelotrichaceae RepID=B0N260_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33690.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_365G1_scaffold_156_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9030..10337
DNA (1308bp) protein (436aa)
MATE efflux family protein n=4 Tax=Erysipelotrichaceae RepID=B0N261_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM90831.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
multi antimicrobial extrusion protein MatE
L1_007_365G1_scaffold_156_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10324..11670)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N262_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33693.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
CBS/transporter associated domain-containing protein
L1_007_365G1_scaffold_156_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11849..12655
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=3 Tax=Erysipelotrichaceae RepID=B0N263_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90829.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcriptional regulator, AraC family
L1_007_365G1_scaffold_156_13
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12679..12948
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N264_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19824.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_365G1_scaffold_156_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12945..13412
DNA (468bp) protein (156aa)
Glyoxalase family protein n=4 Tax=Erysipelotrichaceae RepID=B0N265_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90827.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
glyoxalase
L1_007_365G1_scaffold_156_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13524..14318
DNA (795bp) protein (265aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RJ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45321.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
XRE family transcriptional regulator
L1_007_365G1_scaffold_156_16
unknown

Not on your lists

14450..14545
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_365G1_scaffold_156_17
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14674..18123
DNA (3450bp) protein (1150aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RJ48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45322.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
alkaline phosphatase-like protein
L1_007_365G1_scaffold_156_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18462..19283
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R3E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90816.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_156_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19286..19990
DNA (705bp) protein (235aa)
ABC transporter, permease protein n=3 Tax=Erysipelotrichaceae RepID=B0N269_9FIRM
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EHM90815.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_156_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20007..20741
DNA (735bp) protein (245aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N270_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90814.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_156_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20861..20950
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R3E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM90813.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_156_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20950..22683
DNA (1734bp) protein (578aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=5 Tax=Erysipelotrichaceae RepID=B0N271_9FIRM
L1_007_365G1_scaffold_156_23
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22699..24771
DNA (2073bp) protein (691aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
K+-transporting ATPase, B subunit (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=3 Tax=Erysipelotrichaceae RepID=B0N272_9FIRM
L1_007_365G1_scaffold_156_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24785..25390
DNA (606bp) protein (202aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
kdpC; high affinity K+-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=5 Tax=Erysipelotrichaceae RepID=B0N273_9FIRM
L1_007_365G1_scaffold_156_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25499..28189
DNA (2691bp) protein (897aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
sensor protein KdpD (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N274_9FIRM
L1_007_365G1_scaffold_156_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28182..28892
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N275_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45332.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_156_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28937..30397
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
kdpD; sensor protein KdpD (EC:2.7.13.3)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RJ56_9FIRM
L1_007_365G1_scaffold_156_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30390..31073
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N277_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33742.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
two component transcriptional regulator
L1_007_365G1_scaffold_156_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31170..31376
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N278_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33743.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_156_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31382..31645)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N279_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19839.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Displaying items 1-30 of 106 in total

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