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L1_007_365G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_162_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(193..2841)
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG19_9CLOT
alanyl-tRNA synthetase
L1_007_365G1_scaffold_162_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3135..4496
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D4C0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI91163.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_162_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4753..5670)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61662.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_007_365G1_scaffold_162_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5807..6286)
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG7_9FIRM
L1_007_365G1_scaffold_162_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6341..7942)
DNA (1602bp) protein (534aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEQ61660.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L1_007_365G1_scaffold_162_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8135..9616)
DNA (1482bp) protein (494aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Stage IV sporulation protein A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG5_9FIRM
stage IV sporulation protein A
L1_007_365G1_scaffold_162_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9670..10380)
DNA (711bp) protein (237aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUG9_9CLOT
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ10587.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_162_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10395..11153)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41029.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L1_007_365G1_scaffold_162_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11153..12214)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15846.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_162_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12225..13106)
DNA (882bp) protein (294aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RUH3_9CLOT
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ENZ10584.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
inner-membrane translocator
L1_007_365G1_scaffold_162_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13191..14384)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41026.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L1_007_365G1_scaffold_162_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14583..15593)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG44_9CLOT
L1_007_365G1_scaffold_162_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15615..16268)
DNA (654bp) protein (218aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW87_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_162_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16287..17615)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF7_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribosome-associated GTPase EngA
L1_007_365G1_scaffold_162_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17612..19036)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41018.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_162_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19283..20467
DNA (1185bp) protein (395aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41017.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_162_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20564..21418)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X5G0_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
conserved hypothetical protein TIGR00726
L1_007_365G1_scaffold_162_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21476..21817)
DNA (342bp) protein (114aa)
UPF0102 protein BN757_01464 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG32_9CLOT
UPF0102 protein BN757_01464 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR00252
L1_007_365G1_scaffold_162_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21830..22480)
DNA (651bp) protein (217aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL70_9CLOT
L1_007_365G1_scaffold_162_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22480..23397)
DNA (918bp) protein (306aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFZ8_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosome biogenesis GTP-binding protein YlqF
L1_007_365G1_scaffold_162_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23402..24028)
DNA (627bp) protein (209aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Signal peptidase I n=3 Tax=Clostridium RepID=N9YS12_9CLOT
signal peptidase I
L1_007_365G1_scaffold_162_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24052..24399)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=7 Tax=Clostridium RepID=A8RUI9_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
50S ribosomal protein L19
L1_007_365G1_scaffold_162_23
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24526..25797)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLK5_9CLOT
Magnesium and cobalt efflux protein CorC {ECO:0000313|EMBL:KJJ76554.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_365G1_scaffold_162_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25859..26797)
DNA (939bp) protein (313aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVU9_9CLOT
tRNA (guanine-N1)-methyltransferase
L1_007_365G1_scaffold_162_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26804..29473)
DNA (2670bp) protein (890aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFN1_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA mismatch repair protein MutS
L1_007_365G1_scaffold_162_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29487..31025)
DNA (1539bp) protein (513aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKR1_9CLOT
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_007_365G1_scaffold_162_27
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31252..33954)
DNA (2703bp) protein (901aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JK42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31076.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
signaling protein
L1_007_365G1_scaffold_162_28
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34066..35844)
DNA (1779bp) protein (593aa)
Methyl-accepting chemotaxis protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GSU9_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL40891.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_365G1_scaffold_162_29
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35959..37023)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KBD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43770.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L1_007_365G1_scaffold_162_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37020..37718)
DNA (699bp) protein (233aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|SAAS:SAAS00030493};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2P2_EUBE2
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Displaying items 1-30 of 100 in total

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