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L1_007_365G1_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_164_1
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..538)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R730_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF46692.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L1_007_365G1_scaffold_164_2

Not on your lists

comp(752..1417)
DNA (666bp) protein (222aa)
Uncharacterized protein (Fragment) n=2 Tax=human gut metagenome RepID=K1SN91_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59028.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_365G1_scaffold_164_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1642..1923
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4KS25_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09677.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_365G1_scaffold_164_4
unknown

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2090..2245
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_365G1_scaffold_164_5
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2247..2525
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z4I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28971.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
hypothetical protein
L1_007_365G1_scaffold_164_6
unknown

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2761..2895
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_365G1_scaffold_164_7
unknown

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2886..3083
DNA (198bp) protein (66aa)

This feature has no annotations

L1_007_365G1_scaffold_164_8
unknown

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3084..3443
DNA (360bp) protein (120aa)

This feature has no annotations

L1_007_365G1_scaffold_164_9
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3458..5059
DNA (1602bp) protein (534aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R752_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDF45676.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Spermidine synthase
L1_007_365G1_scaffold_164_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5072..5962
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=2 Tax=root RepID=A6BGE2_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDM63353.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional regulator
L1_007_365G1_scaffold_164_11

Not on your lists

6097..6345
DNA (249bp) protein (83aa)
Organophosphate reductase n=1 Tax=human gut metagenome RepID=K1SA38_9ZZZZ
Aldo/keto reductases, related to diketogulonate reductase
Organophosphate reductase {ECO:0000313|EMBL:EKC44346.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_007_365G1_scaffold_164_12
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7196..7819
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F8BCD2
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AIQ52847.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
L1_007_365G1_scaffold_164_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8018..11167
DNA (3150bp) protein (1050aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KVF5_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L1_007_365G1_scaffold_164_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11282..13624
DNA (2343bp) protein (781aa)
Ferrous iron transporter FeoB n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDU2_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CCZ78937.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferrous iron transporter FeoB
L1_007_365G1_scaffold_164_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13700..14584
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V653_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78936.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_164_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14894..16672
DNA (1779bp) protein (593aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL7_9FIRM
L1_007_365G1_scaffold_164_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16774..18165)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78934.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Na+-driven multidrug efflux pump
L1_007_365G1_scaffold_164_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18358..19137
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78933.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_164_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19602..20363
DNA (762bp) protein (254aa)
Mo-nitrogenase iron protein subunit NifH (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDT7_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:CCZ78932.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_164_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20360..21640
DNA (1281bp) protein (427aa)
Oxidoreductase nitrogenase component 1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5V647_9FIRM
Oxidoreductase nitrogenase component 1 {ECO:0000313|EMBL:CCZ78931.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L1_007_365G1_scaffold_164_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21645..22691
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78930.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L1_007_365G1_scaffold_164_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22754..25084
DNA (2331bp) protein (777aa)
Carbamoyltransferase HypF n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTA3_9FIRM
Carbamoyltransferase HypF {ECO:0000313|EMBL:CCZ78929.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
[NiFe] hydrogenase maturation protein HypF
L1_007_365G1_scaffold_164_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25097..25306
DNA (210bp) protein (70aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NX55_9FIRM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERK42665.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hydrogenase assembly chaperone HypC/HupF
L1_007_365G1_scaffold_164_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25306..26334
DNA (1029bp) protein (343aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDT1_9FIRM
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:CCZ78927.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Hydrogenase maturation factor
L1_007_365G1_scaffold_164_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26354..27361
DNA (1008bp) protein (336aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Roseburia sp. CAG:18 RepID=R5V641_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CCZ78926.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hydrogenase expression/formation protein HypE
L1_007_365G1_scaffold_164_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27378..27653
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78925.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_164_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27650..28459
DNA (810bp) protein (270aa)
Nitrogenase subunit NifH (ATPase) (EC:1.18.6.1)
Putative nitrogenase iron protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT98_9FIRM
Putative nitrogenase iron protein {ECO:0000313|EMBL:CCZ78924.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_164_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28459..29796
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78923.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase component 1 type Oxidoreductase.
L1_007_365G1_scaffold_164_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29784..30902
DNA (1119bp) protein (373aa)
Nitrogenase molybdenum-iron protein alpha and beta chains n=1 Tax=Roseburia sp. CAG:18 RepID=R5VDS6_9FIRM
Nitrogenase molybdenum-iron protein alpha and beta chains {ECO:0000313|EMBL:CCZ78922.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Nitrogenase molybdenum-iron protein, alpha and beta chains
L1_007_365G1_scaffold_164_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30859..31152
DNA (294bp) protein (98aa)
Putative DNA-binding response regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5V637_9FIRM
Putative DNA-binding response regulator {ECO:0000313|EMBL:CCZ78921.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
two-component system LytT family response regulator
Displaying items 1-30 of 93 in total

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