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L1_007_365G1_scaffold_171

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_171_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..119
DNA (117bp) protein (39aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2B1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU97824.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Helix-turn-helix.
L1_007_365G1_scaffold_171_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

116..337
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2B1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU97824.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Helix-turn-helix.
L1_007_365G1_scaffold_171_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

321..704
DNA (384bp) protein (128aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDK4_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EDP20922.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
RNA polymerase sigma factor, sigma-70 family
L1_007_365G1_scaffold_171_4
unknown

Not on your lists

comp(758..889)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_007_365G1_scaffold_171_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1071..1643)
DNA (573bp) protein (191aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4W4_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:EEU97035.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
probable proton-coupled thiamine transporter YuaJ
L1_007_365G1_scaffold_171_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1945..2190
DNA (246bp) protein (82aa)
Putative sporulation transcriptional regulator SpoIIID n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4W5_9FIRM
Putative sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EEU97036.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Stage III sporulation protein D.
L1_007_365G1_scaffold_171_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2227..2991)
DNA (765bp) protein (255aa)
RNA polymerase sigma factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4W6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_007_365G1_scaffold_171_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3069..3770)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QHP0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
RNA polymerase, sigma 29 subunit, SigE
L1_007_365G1_scaffold_171_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3800..4681)
DNA (882bp) protein (294aa)
Putative sigma-E processing peptidase SpoIIGA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4W8_9FIRM
Putative sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:EEU97039.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_171_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5556..7913
DNA (2358bp) protein (786aa)
ABC-type bacteriocin transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X1_9FIRM
ABC-type bacteriocin transporter {ECO:0000313|EMBL:EEU97042.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
bacteriocin-processing peptidase. Cysteine peptidase. MEROPS family C39
L1_007_365G1_scaffold_171_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8024..8431
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97043.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_171_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8888..9253
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZL26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06107.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L1_007_365G1_scaffold_171_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9433..9888
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97046.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_171_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9890..11002
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97047.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Multidrug resistance efflux pump
L1_007_365G1_scaffold_171_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11039..12541
DNA (1503bp) protein (501aa)
Bacterial group 2 Ig-like protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X7_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EEU97048.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Bacterial surface proteins containing Ig-like domains
L1_007_365G1_scaffold_171_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12685..13719
DNA (1035bp) protein (345aa)
Membrane protease subunits, stomatin/prohibitin homologs n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBL4_9FIRM
Membrane protease subunits, stomatin/prohibitin homologs
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EDP22577.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_007_365G1_scaffold_171_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13719..13919
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97050.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_171_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14067..15164)
DNA (1098bp) protein (366aa)
ApbE family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y0_9FIRM
ApbE family protein {ECO:0000313|EMBL:EEU97051.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_007_365G1_scaffold_171_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15161..15583)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97052.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_171_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15700..16713)
DNA (1014bp) protein (338aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EEU97053.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EEU97053.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y2_9FIRM
L1_007_365G1_scaffold_171_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16925..17407
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y3_9FIRM
ybaK/ebsC protein
L1_007_365G1_scaffold_171_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17876..18376
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y6_9FIRM
L1_007_365G1_scaffold_171_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18386..19864
DNA (1479bp) protein (493aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZL65_9FIRM
L1_007_365G1_scaffold_171_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19869..20915
DNA (1047bp) protein (349aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y8_9FIRM
L1_007_365G1_scaffold_171_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20909..21505
DNA (597bp) protein (199aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Y9_9FIRM
L1_007_365G1_scaffold_171_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21682..22482
DNA (801bp) protein (267aa)
IMP cyclohydrolase-like protein (Fragment) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z0_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EEU97002.1}; Flags: Fragment;; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Archaeal IMP cyclohydrolase
L1_007_365G1_scaffold_171_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22507..23688
DNA (1182bp) protein (394aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z1_9FIRM
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EEU97003.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_171_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23892..25193
DNA (1302bp) protein (434aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4Z2_9FIRM
L1_007_365G1_scaffold_171_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25384..29076
DNA (3693bp) protein (1231aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EDP22479.1}; EC=6.3.5.3 {ECO:0000313|EMBL:EDP22479.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8D5_9FIRM
L1_007_365G1_scaffold_171_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29217..30662
DNA (1446bp) protein (482aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBK97854.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CBK97854.1};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Adenylosuccinate lyase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2W1_9FIRM
Displaying items 1-30 of 103 in total

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