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L1_007_365G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_196_1
unknown

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comp(1..93)
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

L1_007_365G1_scaffold_196_2
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(113..376)
-----------------
DNA (264bp)
protein (88aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZYF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ17359.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L1_007_365G1_scaffold_196_3
unknown

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comp(658..948)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

L1_007_365G1_scaffold_196_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(945..1370)
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98218.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted hydrolase of the alpha/beta superfamily
L1_007_365G1_scaffold_196_5
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1407..1628)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QI71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30586.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted hydrolase of the alpha/beta superfamily
L1_007_365G1_scaffold_196_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1710..2111)
-----------------
DNA (402bp)
protein (134aa)
Mutator mutT protein {ECO:0000313|EMBL:EEU98217.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEU98217.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Mutator mutT protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K7_9FIRM
L1_007_365G1_scaffold_196_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2501..5659)
-----------------
DNA (3159bp)
protein (1053aa)
Helicase C-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K6_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EEU98216.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA or RNA helicases of superfamily II
L1_007_365G1_scaffold_196_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5909..6070
-----------------
DNA (162bp)
protein (54aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUY9_9FIRM
Sugar phosphate isomerase {ECO:0000313|EMBL:KJF40014.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
xylose isomerase
L1_007_365G1_scaffold_196_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6260..7114)
-----------------
DNA (855bp)
protein (285aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K4_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU98214.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_196_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7149..8039)
-----------------
DNA (891bp)
protein (297aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K3_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU98213.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_196_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8053..8979)
-----------------
DNA (927bp)
protein (309aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K2_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU98212.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
binding-protein-dependent transport system inner membrane protein
L1_007_365G1_scaffold_196_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9116..10684)
-----------------
DNA (1569bp)
protein (523aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU98211.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L1_007_365G1_scaffold_196_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10659..12506)
-----------------
DNA (1848bp)
protein (616aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1K0_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEU98210.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
integral membrane sensor signal transduction histidine kinase
L1_007_365G1_scaffold_196_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12636..14039)
-----------------
DNA (1404bp)
protein (468aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1J9_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU98209.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
family 1 extracellular solute-binding protein
L1_007_365G1_scaffold_196_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14147..15340)
-----------------
DNA (1194bp)
protein (398aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98208.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_196_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15546..16331
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98207.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function, DUF624.
L1_007_365G1_scaffold_196_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16601..18511
-----------------
DNA (1911bp)
protein (637aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98206.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_196_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18435..18914)
-----------------
DNA (480bp)
protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1J0_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU98200.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulators
L1_007_365G1_scaffold_196_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18955..20619)
-----------------
DNA (1665bp)
protein (555aa)
Na+/H+ antiporter family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I9_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EEU98199.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transporter, NhaC family (TC 2.A.35)
L1_007_365G1_scaffold_196_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20622..20897
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98198.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_196_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20911..21297)
-----------------
DNA (387bp)
protein (129aa)
Thioesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I7_9FIRM
Thioesterase family protein {ECO:0000313|EMBL:EEU98197.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Thioesterase superfamily
L1_007_365G1_scaffold_196_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21559..21900
-----------------
DNA (342bp)
protein (114aa)
Transcriptional regulator, ArsR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I4_9FIRM
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EEU98194.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, ArsR family
L1_007_365G1_scaffold_196_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21980..22201
-----------------
DNA (222bp)
protein (74aa)
Heavy metal-associated domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I3_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEU98193.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Heavy-metal-associated domain.
L1_007_365G1_scaffold_196_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22525..24417
-----------------
DNA (1893bp)
protein (631aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EEU98191.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EEU98191.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I1_9FIRM
L1_007_365G1_scaffold_196_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24577..26376
-----------------
DNA (1800bp)
protein (600aa)
Peptidase, M24 family {ECO:0000313|EMBL:EEU98190.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEU98190.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase, M24 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1I0_9FIRM
L1_007_365G1_scaffold_196_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26420..27361)
-----------------
DNA (942bp)
protein (314aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEU98189.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEU98189.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1H9_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L1_007_365G1_scaffold_196_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27450..28172
-----------------
DNA (723bp)
protein (241aa)
LytTr DNA-binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1H8_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEU98188.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulator of the LytR/AlgR family
L1_007_365G1_scaffold_196_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28235..28885)
-----------------
DNA (651bp)
protein (217aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1H5_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEU98185.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_007_365G1_scaffold_196_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29023..30195
-----------------
DNA (1173bp)
protein (391aa)
Phospholipase, patatin family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1H4_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EEU98184.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_007_365G1_scaffold_196_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30192..31802
-----------------
DNA (1611bp)
protein (537aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Putative phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1H3_9FIRM
Putative phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EEU98183.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Displaying items 1-30 of 104 in total

View Taxonomy