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L1_007_365G1_scaffold_206

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_206_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..277
DNA (276bp) protein (92aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LWL2_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Uncharacterized protein {ECO:0000313|EMBL:EGN46220.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L1_007_365G1_scaffold_206_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(368..826)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79992.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator, AsnC family
L1_007_365G1_scaffold_206_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1045..2388
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_206_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2824..3639
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79986.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_206_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3629..5806
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CP08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79984.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_206_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5806..7656
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79982.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type sugar transport system, periplasmic component
L1_007_365G1_scaffold_206_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7662..10610
DNA (2949bp) protein (983aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79980.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_206_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10678..11565
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79978.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L1_007_365G1_scaffold_206_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11591..13480
DNA (1890bp) protein (630aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79977.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_007_365G1_scaffold_206_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13501..14670
DNA (1170bp) protein (390aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPU8_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDD79976.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amidohydrolase
L1_007_365G1_scaffold_206_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15209..16999
DNA (1791bp) protein (597aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79975.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized flavoproteins
L1_007_365G1_scaffold_206_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17364..18068
DNA (705bp) protein (235aa)
CRISPR-associated endoribonuclease cas6 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF79_9FIRM
CRISPR-associated endoribonuclease cas6 {ECO:0000313|EMBL:EES76426.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cas6; CRISPR-associated protein Cas6
L1_007_365G1_scaffold_206_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18157..19911
DNA (1755bp) protein (585aa)
CRISPR-associated protein cas8b/csh1, subtype I-b/hmari n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF78_9FIRM
CRISPR-associated protein cas8b/csh1, subtype I-b/hmari {ECO:0000313|EMBL:EES76425.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CRISPR-associated protein Cas8b/Csh1, subtypeI-B/HMARI
L1_007_365G1_scaffold_206_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19904..20842
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76424.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_206_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20846..21583
DNA (738bp) protein (246aa)
CRISPR-associated protein cas5, subtype I-b/hmari n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF76_9FIRM
CRISPR-associated protein cas5, subtype I-b/hmari {ECO:0000313|EMBL:EES76423.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cas5; cas5h: CRISPR-associated protein Cas5
L1_007_365G1_scaffold_206_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21634..24231
DNA (2598bp) protein (866aa)
CRISPR-associated helicase cas3 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF75_9FIRM
CRISPR-associated helicase cas3 {ECO:0000313|EMBL:EES76422.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cas3; crispr-associated helicase Cas3
L1_007_365G1_scaffold_206_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24203..24631
DNA (429bp) protein (143aa)
cas1-2: CRISPR-associated endonuclease Cas1 2 (EC:3.1.-.-)
CRISPR-associated endonuclease cas1 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF74_9FIRM
CRISPR-associated endonuclease cas1 {ECO:0000313|EMBL:EES76421.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_206_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24697..24987
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cas2; CRISPR-associated endoribonuclease Cas2 (EC:3.1.-.-)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF73_9FIRM
L1_007_365G1_scaffold_206_19
unknown

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comp(25608..26117)
DNA (510bp) protein (170aa)

This feature has no annotations

L1_007_365G1_scaffold_206_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26468..28156
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CL55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78964.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_007_365G1_scaffold_206_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28246..29904)
DNA (1659bp) protein (553aa)
Alpha amylase catalytic region n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLR6_9FIRM
Alpha amylase catalytic region {ECO:0000313|EMBL:CDD78966.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
alpha amylase catalytic subunit
L1_007_365G1_scaffold_206_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30282..31184
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78968.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L1_007_365G1_scaffold_206_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31271..33646)
DNA (2376bp) protein (792aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase n=2 Tax=Ruminococcus RepID=C6JF68_9FIRM
L1_007_365G1_scaffold_206_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34181..35686
DNA (1506bp) protein (502aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF67_9FIRM
L1_007_365G1_scaffold_206_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36019..36549
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78972.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_007_365G1_scaffold_206_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36810..38228
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF64_9FIRM
L1_007_365G1_scaffold_206_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38240..38428
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76409.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_007_365G1_scaffold_206_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38422..39186
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76408.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L1_007_365G1_scaffold_206_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39526..40710
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CM01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78980.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Major Facilitator Superfamily.
L1_007_365G1_scaffold_206_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41123..42088)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78981.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 100 in total

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