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L1_007_365G1_scaffold_216

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Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_216_1
unknown

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1..492
DNA (492bp) protein (164aa)
cytochrome C biogenesis protein CcdA
L1_007_365G1_scaffold_216_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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553..954
DNA (402bp) protein (134aa)
Glyoxalase family protein n=2 Tax=Bifidobacterium RepID=C0BQI8_9BIFI
Glyoxalase family protein {ECO:0000313|EMBL:EEG71751.1}; Lyase {ECO:0000313|EMBL:BAR03008.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L1_007_365G1_scaffold_216_3
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1123..2253)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU36_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14745.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
NagC family transcriptional regulator
L1_007_365G1_scaffold_216_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2471..3739
DNA (1269bp) protein (423aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQI6_9BIFI
Transport protein {ECO:0000313|EMBL:BAR03010.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rbtT; hypothetical protein
L1_007_365G1_scaffold_216_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3813..4853
DNA (1041bp) protein (347aa)
GroES-like protein n=2 Tax=Bifidobacterium RepID=C0BQI5_9BIFI
xylitol (sorbitol) dehydrogenase
Sulfurtransferase {ECO:0000313|EMBL:KEF28894.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L1_007_365G1_scaffold_216_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4893..5864
DNA (972bp) protein (324aa)
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium RepID=C0BQI4_9BIFI
Putative transcriptional regulator {ECO:0000313|EMBL:BAR03012.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG71747.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
transcriptional regulator
L1_007_365G1_scaffold_216_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6218..8947
DNA (2730bp) protein (910aa)
Aldehyde dehydrogenase (NAD) family protein n=2 Tax=Bifidobacterium RepID=C0BQI3_9BIFI
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
acetaldehyde dehydrogenase
L1_007_365G1_scaffold_216_8
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9425..9733
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=41 Tax=Bacteria RepID=D2Q8G9_BIFDB
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1261060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7672.;"
L1_007_365G1_scaffold_216_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9751..10392
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=3 Tax=Bifidobacterium RepID=B6XWW1_9BIFI
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rplC; 50S ribosomal protein L3
L1_007_365G1_scaffold_216_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10399..11064
DNA (666bp) protein (222aa)
50S ribosomal protein L4 n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NRE6_9BIFI
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L1_007_365G1_scaffold_216_11

Not on your lists


11070..11366
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=10 Tax=Bacteria RepID=A1A071_BIFAA
50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_007_365G1_scaffold_216_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11403..12233
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=3 Tax=Bifidobacterium RepID=B6XWV8_9BIFI
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
50S ribosomal protein L2
L1_007_365G1_scaffold_216_13
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12249..12527
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=11 Tax=root RepID=RS19_BIFAA
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L1_007_365G1_scaffold_216_14
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12544..12903
DNA (360bp) protein (120aa)
50S ribosomal protein L22 n=5 Tax=Bacteria RepID=RL22_BIFAA
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
L1_007_365G1_scaffold_216_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12906..13709
DNA (804bp) protein (268aa)
30S ribosomal protein S3 n=1 Tax=uncultured bacterium RepID=S6CPE7_9BACT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S3
L1_007_365G1_scaffold_216_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13718..14137
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=5 Tax=Bacteria RepID=RL16_BIFAA
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_007_365G1_scaffold_216_17
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14137..14394
DNA (258bp) protein (86aa)
50S ribosomal protein L29 n=2 Tax=Bifidobacterium RepID=B6XWV3_9BIFI
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L1_007_365G1_scaffold_216_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14394..14654
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NVC8_9BIFI
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S17
L1_007_365G1_scaffold_216_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


14746..15114
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=5 Tax=Bacteria RepID=RL14_BIFAA
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L1_007_365G1_scaffold_216_20
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15116..15451
DNA (336bp) protein (112aa)
50S ribosomal protein L24 n=5 Tax=Bacteria RepID=RL24_BIFAA
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L1_007_365G1_scaffold_216_21
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


15448..16020
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=2 Tax=Bifidobacterium RepID=B6XWU9_9BIFI
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_365G1_scaffold_216_22
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16022..16207
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=14 Tax=Bifidobacteriaceae RepID=RS14Z_BIFAA
30S ribosomal protein S14-1
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
L1_007_365G1_scaffold_216_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16294..16692
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=8 Tax=Bifidobacterium RepID=RS8_BIFAA
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L1_007_365G1_scaffold_216_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16710..17249
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQG5_9BIFI
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
50S ribosomal protein L6
L1_007_365G1_scaffold_216_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17249..17620
DNA (372bp) protein (124aa)
50S ribosomal protein L18 n=2 Tax=Bifidobacterium RepID=B6XWU5_9BIFI
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L1_007_365G1_scaffold_216_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


17617..18342
DNA (726bp) protein (242aa)
30S ribosomal protein S5 n=2 Tax=Bifidobacterium RepID=B6XWU4_9BIFI
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
30S ribosomal protein S5
L1_007_365G1_scaffold_216_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18342..18524
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=2 Tax=Bifidobacterium RepID=B6XWU3_9BIFI
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L1_007_365G1_scaffold_216_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18527..18973
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=2 Tax=Bifidobacterium RepID=B6XWU2_9BIFI
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
50S ribosomal protein L15
L1_007_365G1_scaffold_216_29
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19217..20554
DNA (1338bp) protein (446aa)
Protein translocase subunit SecY n=2 Tax=Bifidobacterium RepID=B6XWU1_9BIFI
preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_365G1_scaffold_216_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20663..21223
DNA (561bp) protein (187aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Adenylate kinase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVH8_9BIFI
adenylate kinase
Displaying items 1-30 of 162 in total

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