ggKbase home page

L1_007_365G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_219_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

309..683
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97830.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF3592).
L1_007_365G1_scaffold_219_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

699..1634
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97831.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
L1_007_365G1_scaffold_219_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1678..3453)
DNA (1776bp) protein (592aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2B9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU97832.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_365G1_scaffold_219_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3450..5189)
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU97833.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATP-binding cassette subfamily C protein
L1_007_365G1_scaffold_219_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5432..6586)
DNA (1155bp) protein (385aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C2_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEU97835.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
diguanylate cyclase (GGDEF) domain
L1_007_365G1_scaffold_219_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6616..7641)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AIT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ26403.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_365G1_scaffold_219_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8085..9284)
DNA (1200bp) protein (400aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEU97836.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU97836.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C3_9FIRM
23S rRNA (uracil-5-)-methyltransferase RumA
L1_007_365G1_scaffold_219_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9623..10045)
DNA (423bp) protein (141aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C4_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EEU97837.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted transcriptional regulator
L1_007_365G1_scaffold_219_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10362..11444
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C5_9FIRM
L1_007_365G1_scaffold_219_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11469..12629
DNA (1161bp) protein (387aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEU97839.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEU97839.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C6_9FIRM
L1_007_365G1_scaffold_219_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12782..13651)
DNA (870bp) protein (290aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C7_9FIRM
L1_007_365G1_scaffold_219_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13963..15396
DNA (1434bp) protein (478aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C8_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEU97841.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_365G1_scaffold_219_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15429..16385
DNA (957bp) protein (319aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2C9_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEU97842.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Glycerophosphoryl diester phosphodiesterase
L1_007_365G1_scaffold_219_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16455..17756)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RV59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68096.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
oxidoreductase domain-containing protein
L1_007_365G1_scaffold_219_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18101..19684
DNA (1584bp) protein (528aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVY7_MAHA5
Uncharacterized protein {ECO:0000313|EMBL:KJF38440.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter substrate-binding protein
L1_007_365G1_scaffold_219_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19800..20756
DNA (957bp) protein (319aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVY8_MAHA5
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF38439.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L1_007_365G1_scaffold_219_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20750..21664
DNA (915bp) protein (305aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus lactis 154 RepID=G4H8Q2_9BACL
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF38438.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
CUT1 family carbohydrate ABC transporter membrane protein 2
L1_007_365G1_scaffold_219_18
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

21682..24387
DNA (2706bp) protein (902aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6C275_9BACI
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
L1_007_365G1_scaffold_219_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24459..26729)
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037BBC60
Uncharacterized protein {ECO:0000313|EMBL:KJF38437.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
AraC family transcriptional regulator
L1_007_365G1_scaffold_219_20
unknown

Not on your lists

comp(27397..27819)
DNA (423bp) protein (141aa)

This feature has no annotations

L1_007_365G1_scaffold_219_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27887..31273)
DNA (3387bp) protein (1129aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Helicase C-terminal domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZK52_9FIRM
Helicase C-terminal domain protein {ECO:0000313|EMBL:EFQ06367.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L1_007_365G1_scaffold_219_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31396..31785)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97858.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_007_365G1_scaffold_219_23
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31938..32231)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ84103.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
type I restriction-modification system subunit S
L1_007_365G1_scaffold_219_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32372..32614
DNA (243bp) protein (81aa)
DNA binding domain, excisionase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAC3_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDP22265.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_219_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32630..34015
DNA (1386bp) protein (462aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8V3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP22263.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Phage integrase family.
L1_007_365G1_scaffold_219_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34443..34691
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8Y8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01301.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_365G1_scaffold_219_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34758..35372)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S695_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP23067.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_007_365G1_scaffold_219_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36080..37180
DNA (1101bp) protein (367aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
D-mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEM0_9FIRM
L1_007_365G1_scaffold_219_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37186..38772
DNA (1587bp) protein (529aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol-1-phosphate/altronate dehydrogenases {ECO:0000313|EMBL:CBL02325.1}; EC=1.1.1.57 {ECO:0000313|EMBL:CBL02325.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Mannitol-1-phosphate/altronate dehydrogenases n=2 Tax=Faecalibacterium prausnitzii RepID=D4KBW2_9FIRM
L1_007_365G1_scaffold_219_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38896..39921)
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
GroES-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPQ8_9FIRM
GroES-like protein {ECO:0000313|EMBL:EFB75254.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Displaying items 1-30 of 84 in total

View Taxonomy