ggKbase home page

L1_007_365G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_240_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(130..2208)
DNA (2079bp) protein (693aa)
Cytochrome c-type biogenesis protein DsbD,protein-disulfide reductase {ECO:0000313|EMBL:CDM06839.1}; EC=1.8.1.8 {ECO:0000313|EMBL:CDM06839.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Cytochrome C biogenesis protein transmembrane region n=4 Tax=Bacteroides RepID=C3QBJ5_9BACE
Thiol:disulfide interchange protein
L1_007_365G1_scaffold_240_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2224..2523)
DNA (300bp) protein (100aa)
Stress responsive A/B barrel domain protein n=6 Tax=Bacteroides RepID=C3QBJ4_9BACE
Stress responsive A/B Barrel Domain.
Dabb {ECO:0000313|EMBL:CDM06838.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L1_007_365G1_scaffold_240_3
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2590..3243
DNA (654bp) protein (218aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=6 Tax=Bacteroides RepID=D4WZM1_9BACE
L1_007_365G1_scaffold_240_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3281..4672
DNA (1392bp) protein (464aa)
ABC transporter substrate-binding protein n=2 Tax=Bacteroides RepID=D7J9K0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87486.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
L1_007_365G1_scaffold_240_5
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4767..6311)
DNA (1545bp) protein (515aa)
Na+/proline symporter n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D3U3_9BACE
Na+/proline symporter
Na+/proline symporter {ECO:0000313|EMBL:CBK69095.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6308..6433)
DNA (126bp) protein (42aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A5ZH17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21386.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_365G1_scaffold_240_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6502..7104)
DNA (603bp) protein (201aa)
Nitroreductase n=6 Tax=Bacteroides RepID=D6D3U1_9BACE
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:CBK69093.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7116..9863)
DNA (2748bp) protein (916aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:CBK69092.1}; EC=2.1.1.13 {ECO:0000313|EMBL:CBK69092.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
methionine synthase (B12-dependent) (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D3U0_9BACE
L1_007_365G1_scaffold_240_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9953..10405)
DNA (453bp) protein (151aa)
SsrA-binding protein n=8 Tax=Bacteroides RepID=C3QBI7_9BACE
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
SsrA-binding protein
L1_007_365G1_scaffold_240_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10415..10960)
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QBI6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDM06830.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
Protein of unknown function (DUF1282).
L1_007_365G1_scaffold_240_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10993..11754)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M5Y9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02559.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11837..12337)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M5Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02558.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_13
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12774..13178)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M5Y7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02557.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13396..14097
DNA (702bp) protein (234aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C9KYE6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69086.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14118..15116
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZH08_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20717.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_365G1_scaffold_240_16
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15424..15723
DNA (300bp) protein (100aa)
Predicted nucleotidyltransferases n=3 Tax=Bacteroides RepID=D6D3T2_9BACE
Predicted nucleotidyltransferases
Uncharacterized protein {ECO:0000313|EMBL:EIY87473.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L1_007_365G1_scaffold_240_17
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15716..16054
DNA (339bp) protein (113aa)
Putative toxin-antitoxin system, antitoxin component n=5 Tax=Bacteroides RepID=C3QBH9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02553.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_18
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17027..17389
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M5Y1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02551.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_19
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17542..17943)
DNA (402bp) protein (134aa)
FKBP-type peptidyl-prolyl cis-trans isomerases 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Bacteroides RepID=D6D3T0_9BACE
L1_007_365G1_scaffold_240_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18044..23674
DNA (5631bp) protein (1877aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UXM5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87468.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Large extracellular alpha-helical protein
L1_007_365G1_scaffold_240_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23815..26256
DNA (2442bp) protein (814aa)
penicillin-binding protein 1C (EC:2.4.1.-)
Penicillin-binding protein 1C {ECO:0000313|EMBL:CBK69080.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBK69080.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Penicillin-binding protein 1C n=4 Tax=Bacteroides RepID=D6D3S8_9BACE
L1_007_365G1_scaffold_240_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26283..27458
DNA (1176bp) protein (392aa)
Arabinose efflux permease n=6 Tax=Bacteroides RepID=D6D3S7_9BACE
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CBK69079.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_23
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27504..27938
DNA (435bp) protein (145aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QBH1_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI11642.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L1_007_365G1_scaffold_240_24
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28093..29520
DNA (1428bp) protein (476aa)
Na+/H+ antiporter NhaC n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JKU5_9BACE
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EIY87464.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
transporter, NhaC family (TC 2.A.35)
L1_007_365G1_scaffold_240_25
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29588..30178
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D0TTF3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02544.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_240_26
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30225..30926
DNA (702bp) protein (234aa)
Transcriptional regulator n=3 Tax=Bacteroides RepID=D6D3S4_9BACE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK69076.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30997..31338)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=3 Tax=Bacteroides RepID=D6D3S3_9BACE
Protein of unknown function (DUF1044).
Uncharacterized protein {ECO:0000313|EMBL:CBK69075.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_240_28
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31328..31582)
DNA (255bp) protein (85aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QBG6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO49300.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L1_007_365G1_scaffold_240_29
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31671..32738)
DNA (1068bp) protein (356aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Bacteroides RepID=D6D3S1_9BACE
L1_007_365G1_scaffold_240_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32919..34367
DNA (1449bp) protein (483aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8YQU6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY64892.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
periplasmic protease
Displaying items 1-30 of 79 in total

View Taxonomy