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L1_007_365G1_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_243_1
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(147..704)
DNA (558bp) protein (186aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Phosphoheptose isomerase n=2 Tax=Megasphaera RepID=G0VNA0_MEGEL
phosphoheptose isomerase
L1_007_365G1_scaffold_243_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(722..1576)
DNA (855bp) protein (285aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NJE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29273.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L1_007_365G1_scaffold_243_3
Selenomonas sp. oral taxon 892, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1671..2393)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Selenomonas sp. oral taxon 892 str. F0426 RepID=U2KTB8_9FIRM
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:ERJ95335.1}; TaxID=1321786 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 892 str. F0426.;"
GntR family transcriptional regulator
L1_007_365G1_scaffold_243_4
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2581..3285
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNW1_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37451.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_365G1_scaffold_243_5
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3288..3809
DNA (522bp) protein (174aa)
secondary thiamine-phosphate synthase enzyme n=1 Tax=Megamonas rupellensis RepID=UPI00037065E2
Putative secondary thiamine-phosphate synthase enzyme {ECO:0000313|EMBL:EFF66472.1}; TaxID=585503 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia ATCC 43541.;"
hypothetical protein
L1_007_365G1_scaffold_243_6
Centipeda periodontii, Centipeda, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3968..4945
DNA (978bp) protein (326aa)
Transcriptional regulator n=1 Tax=Centipeda periodontii DSM 2778 RepID=F5RNX7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EGK58367.1}; TaxID=888060 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Centipeda.;" source="Centipeda periodontii DSM 2778.;"
hypothetical protein
L1_007_365G1_scaffold_243_7
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5178..5579
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000366AE77
Glucitol operon activator protein {ECO:0000313|EMBL:ERL25266.1}; TaxID=1321781 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
Glucitol operon activator
L1_007_365G1_scaffold_243_8
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5658..6200
DNA (543bp) protein (181aa)
PTS system, glucitol/sorbitol-specific, IIC component {ECO:0000313|EMBL:EFW29873.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFW29873.1};; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
PTS system, glucitol/sorbitol-specific, IIC component n=1 Tax=Selenomonas artemidis F0399 RepID=E7N291_9FIRM
PTS system, glucitol/sorbitol-specific, IIC component
L1_007_365G1_scaffold_243_9
Selenomonas noxia, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6204..7229
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Selenomonas noxia F0398 RepID=G5H0A9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHG25676.1}; TaxID=702437 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas noxia F0398.;"
hypothetical protein
L1_007_365G1_scaffold_243_10
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7253..7624
DNA (372bp) protein (124aa)
Phosphotransferase system sorbitol-specific component IIA (EC:2.7.1.69)
PTS system glucitol/sorbitol-specific IIA component n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V445_9FIRM
PTS system glucitol/sorbitol-specific IIA component {ECO:0000313|EMBL:EEQ48309.1}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueggei ATCC 43531.;"
L1_007_365G1_scaffold_243_11
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7681..9003
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Selenomonas sp. F0473 RepID=K9CME0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU72051.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;"
Predicted homoserine dehydrogenase
L1_007_365G1_scaffold_243_12
unknown

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9197..9391
DNA (195bp) protein (65aa)

This feature has no annotations

L1_007_365G1_scaffold_243_13
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9905..10861)
DNA (957bp) protein (319aa)
Putative membrane protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR84_MEGEL
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCC72329.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_243_14
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11054..11920
DNA (867bp) protein (289aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR83_MEGEL
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_007_365G1_scaffold_243_15
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11924..12661
DNA (738bp) protein (246aa)
FCD domain protein n=3 Tax=Megasphaera RepID=G0VR82_MEGEL
FCD domain protein
FCD domain protein {ECO:0000313|EMBL:CCC72327.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_243_16
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12677..12838
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=Megasphaera RepID=R7MYI7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPP17922.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_365G1_scaffold_243_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12854..14137
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7IY43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP17921.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_365G1_scaffold_243_18
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14411..15820
DNA (1410bp) protein (470aa)
Glycolate oxidase n=2 Tax=Megasphaera RepID=S7J2Y7_9FIRM
Glycolate oxidase {ECO:0000313|EMBL:EPP17920.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
glycolate oxidase
L1_007_365G1_scaffold_243_19
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16027..16473
DNA (447bp) protein (149aa)
Flavodoxin n=2 Tax=Megasphaera RepID=S7HLI6_9FIRM
Flavodoxin {ECO:0000313|EMBL:EPP17919.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
flavodoxin
L1_007_365G1_scaffold_243_20
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16501..17295)
DNA (795bp) protein (265aa)
Transglycosylase n=2 Tax=Megasphaera RepID=S7HLT7_9FIRM
Transglycosylase {ECO:0000313|EMBL:EPP17918.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
transglycosylase
L1_007_365G1_scaffold_243_21
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17494..18738
DNA (1245bp) protein (415aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Argininosuccinate synthase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MYI2_9FIRM
argininosuccinate synthase
L1_007_365G1_scaffold_243_22
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18754..20187
DNA (1434bp) protein (478aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Argininosuccinate lyase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR75_MEGEL
argininosuccinate lyase
L1_007_365G1_scaffold_243_23
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20377..21210
DNA (834bp) protein (278aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MW44_9FIRM
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
L1_007_365G1_scaffold_243_24
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21228..21674
DNA (447bp) protein (149aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=2 Tax=Megasphaera RepID=G0VR73_MEGEL
(3R)-hydroxymyristoyl-ACP dehydratase
L1_007_365G1_scaffold_243_25
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21865..22677
DNA (813bp) protein (271aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MZW1_9FIRM
acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase
L1_007_365G1_scaffold_243_26
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22800..23615
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HLH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP17912.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
hypothetical protein
L1_007_365G1_scaffold_243_27
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23627..24781
DNA (1155bp) protein (385aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Lipid-A-disaccharide synthase n=2 Tax=Megasphaera RepID=G0VR70_MEGEL
lipid-A-disaccharide synthase
L1_007_365G1_scaffold_243_28
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24765..26525
DNA (1761bp) protein (587aa)
Putative lipid A export permease/ATP-binding protein MsbA n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR69_MEGEL
Putative lipid A export permease/ATP-binding protein MsbA {ECO:0000313|EMBL:CCC72314.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
lipid A export permease/ATP-binding protein MsbA
L1_007_365G1_scaffold_243_29
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26531..27865
DNA (1335bp) protein (445aa)
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VR68_MEGEL
3-deoxy-D-manno-octulosonic-acid transferase
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CCC72313.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_243_30
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27870..29018
DNA (1149bp) protein (383aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Tetraacyldisaccharide 4'-kinase n=2 Tax=Megasphaera RepID=S7HLS7_9FIRM
tetraacyldisaccharide 4'-kinase
Displaying items 1-30 of 81 in total

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