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L1_007_365G1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_254_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..120
-----------------
DNA (120bp)
protein (40aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53901.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_365G1_scaffold_254_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

864..1847
-----------------
DNA (984bp)
protein (328aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56038.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_365G1_scaffold_254_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1940..2251
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53241.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_365G1_scaffold_254_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2426..3055
-----------------
DNA (630bp)
protein (210aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56036.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage integrase family protein
L1_007_365G1_scaffold_254_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3042..4070
-----------------
DNA (1029bp)
protein (343aa)
Tyrosine recombinase XerC n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C783_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
xerC; tyrosine recombinase XerC
L1_007_365G1_scaffold_254_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4110..5549)
-----------------
DNA (1440bp)
protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BMM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79404.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
L1_007_365G1_scaffold_254_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5758..6291)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C5S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35668.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_254_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6372..8372)
-----------------
DNA (2001bp)
protein (667aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ligA; DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNS8_9FIRM
L1_007_365G1_scaffold_254_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8314..9003)
-----------------
DNA (690bp)
protein (230aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C779_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56031.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
VanZ family protein
L1_007_365G1_scaffold_254_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9084..9767)
-----------------
DNA (684bp)
protein (228aa)
Sporulation protein YunB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C778_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:EHO35665.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_254_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9811..11061)
-----------------
DNA (1251bp)
protein (417aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C777_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:KGF56029.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
aluminum resistance family protein
L1_007_365G1_scaffold_254_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11100..12098)
-----------------
DNA (999bp)
protein (333aa)
M42 glutamyl aminopeptidase n=2 Tax=Clostridiales RepID=U2C5R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35663.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase M42 family protein
L1_007_365G1_scaffold_254_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12105..13130)
-----------------
DNA (1026bp)
protein (342aa)
endoglucanase M (EC:3.2.1.4)
M42 glutamyl aminopeptidase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56027.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_007_365G1_scaffold_254_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13127..14149)
-----------------
DNA (1023bp)
protein (341aa)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DIB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56026.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidase M42
L1_007_365G1_scaffold_254_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14220..15608)
-----------------
DNA (1389bp)
protein (463aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C773_9FIRM
L1_007_365G1_scaffold_254_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15766..16380
-----------------
DNA (615bp)
protein (205aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C772_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56024.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted methylated DNA-protein cysteine methyltransferase
L1_007_365G1_scaffold_254_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16826..17554)
-----------------
DNA (729bp)
protein (243aa)
Probable transcriptional regulatory protein HMPREF0372_00061 n=3 Tax=Clostridiales RepID=G9YKQ1_9FIRM
Probable transcriptional regulatory protein HMPREF0995_00299 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_254_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17629..18426)
-----------------
DNA (798bp)
protein (266aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DJ02_9CLOT
hypothetical protein
L1_007_365G1_scaffold_254_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18414..19127)
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DDY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO35656.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_254_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19192..19398)
-----------------
DNA (207bp)
protein (69aa)
Hydrid cluster protein-associated redox disulfide domain protein n=3 Tax=Clostridiales RepID=G9YKQ4_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:ERI79653.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L1_007_365G1_scaffold_254_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19537..19815)
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YKQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35654.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_254_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19887..20522)
-----------------
DNA (636bp)
protein (212aa)
RNA polymerase sigma-H factor n=3 Tax=Clostridiales RepID=H1C766_9FIRM
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EHO35653.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative RNA polymerase sigma factor
L1_007_365G1_scaffold_254_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20592..21950)
-----------------
DNA (1359bp)
protein (453aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DHW5_9CLOT
L1_007_365G1_scaffold_254_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21974..22438)
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79200.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_254_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22450..23508)
-----------------
DNA (1059bp)
protein (353aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKQ9_9FIRM
L1_007_365G1_scaffold_254_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23587..24192)
-----------------
DNA (606bp)
protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA n=2 Tax=Clostridiales RepID=G9YKR0_9FIRM
L1_007_365G1_scaffold_254_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24207..24746)
-----------------
DNA (540bp)
protein (180aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=3 Tax=Clostridiales RepID=G9YKR1_9FIRM
L1_007_365G1_scaffold_254_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24853..25731)
-----------------
DNA (879bp)
protein (293aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DEC9_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
xerD; tyrosine recombinase XerD
L1_007_365G1_scaffold_254_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25758..26387)
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53419.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L1_007_365G1_scaffold_254_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26706..28067)
-----------------
DNA (1362bp)
protein (454aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5K1_9CLOT
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:ERI79800.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
Displaying items 1-30 of 93 in total

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