ggKbase home page

L1_007_365G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_255_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
Major carboxysome shell protein 1A n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AYE8_9CLOT
Major carboxysome shell protein 1A {ECO:0000313|EMBL:EHM42329.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
microcompartments protein
L1_007_365G1_scaffold_255_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

186..974
DNA (789bp) protein (263aa)
Putative ATP:cob(I)alamin adenosyltransferase n=2 Tax=Clostridiales RepID=G9YUG1_9FIRM
Putative ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHM42330.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cobalamin adenosyltransferase
L1_007_365G1_scaffold_255_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

989..1600
DNA (612bp) protein (204aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Phosphate propanoyltransferase n=3 Tax=Clostridiales RepID=G9YUG2_9FIRM
propanediol utilization protein
L1_007_365G1_scaffold_255_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1624..2445
DNA (822bp) protein (274aa)
Ethanolamine utilization protein EutJ family protein n=2 Tax=Clostridiales RepID=H1CFE0_9FIRM
Ethanolamine utilization protein EutJ family protein {ECO:0000313|EMBL:EHO32732.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ethanolamine utilization protein EutJ family protein
L1_007_365G1_scaffold_255_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2482..3231
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32731.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_255_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3278..3562
DNA (285bp) protein (95aa)
Putative carbon dioxide concentrating mechanism protein CcmL n=3 Tax=Clostridiales RepID=G9YUG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32730.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
carboxysome protein
L1_007_365G1_scaffold_255_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3620..4972
DNA (1353bp) protein (451aa)
Respiratory-chain NADH dehydrogenase subunit n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUG6_9FIRM
Respiratory-chain NADH dehydrogenase subunit {ECO:0000313|EMBL:EHM42335.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
L1_007_365G1_scaffold_255_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4978..5517
DNA (540bp) protein (180aa)
BMC domain protein n=3 Tax=Clostridiales RepID=G9YUG7_9FIRM
BMC domain protein {ECO:0000313|EMBL:EHM42336.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
microcompartments protein
L1_007_365G1_scaffold_255_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5583..6806
DNA (1224bp) protein (408aa)
Ethanolamine utilization protein, EutH n=3 Tax=Clostridiales RepID=G9YUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32727.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ethanolamine utilization protein
L1_007_365G1_scaffold_255_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6845..7276
DNA (432bp) protein (144aa)
Ethanolamine utilization protein EutQ n=2 Tax=Clostridiales RepID=G9YUG9_9FIRM
Ethanolamine utilization protein EutQ {ECO:0000313|EMBL:ERI78567.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ethanolamine utilization protein (transcriptional regulator)
L1_007_365G1_scaffold_255_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8029..8253)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI78569.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_255_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8652..8750
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32724.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_255_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8884..10638
DNA (1755bp) protein (585aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3E3_9CLOT
L1_007_365G1_scaffold_255_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10659..12734
DNA (2076bp) protein (692aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Potassium-transporting ATPase B chain n=2 Tax=Clostridiales RepID=H1CFD0_9FIRM
potassium-transporting ATPase subunit B
L1_007_365G1_scaffold_255_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12751..13401
DNA (651bp) protein (217aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Potassium-transporting ATPase C chain n=3 Tax=Clostridiales RepID=G9YMV3_9FIRM
potassium-transporting ATPase subunit C
L1_007_365G1_scaffold_255_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13471..14190
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32720.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_365G1_scaffold_255_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14259..14900
DNA (642bp) protein (214aa)
ulaF2; L-ribulose-5-phosphate 4-epimerase UlaF (EC:5.1.3.4)
Putative L-ribulose-5-phosphate 4-epimerase n=3 Tax=Clostridiales RepID=G9YMV5_9FIRM
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ERI78577.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_255_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14954..17584)
DNA (2631bp) protein (877aa)
ATP-dependent chaperone protein ClpB n=2 Tax=Clostridiales RepID=G9YMV6_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ATP-dependent chaperone ClpB
L1_007_365G1_scaffold_255_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17614..17814)
DNA (201bp) protein (67aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YMV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32716.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Helix-turn-helix.
L1_007_365G1_scaffold_255_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17908..18120
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DG19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78541.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_255_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18141..18569)
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=3 Tax=Clostridiales RepID=G9YMV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32714.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hsp20; Heat shock protein Hsp20
L1_007_365G1_scaffold_255_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18860..20257
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3A8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI78543.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
MATE efflux family protein
L1_007_365G1_scaffold_255_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20318..20671
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2BK82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32858.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_255_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20731..22038)
DNA (1308bp) protein (436aa)
Transporter, major facilitator family protein n=2 Tax=Clostridiales RepID=G9YMW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54641.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ProP; major facilitator superfamily permease
L1_007_365G1_scaffold_255_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22059..23057)
DNA (999bp) protein (333aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DAQ9_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:ERI78547.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted metal-dependent hydrolase of the TIM-barrel fold
L1_007_365G1_scaffold_255_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23320..24099
DNA (780bp) protein (260aa)
Transcriptional regulator, TetR family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMW5_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EHM53847.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
TetR family transcriptional regulator
L1_007_365G1_scaffold_255_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24171..24443
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54644.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L1_007_365G1_scaffold_255_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24714..25733)
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=3 Tax=Clostridiales RepID=G9YNN5_9FIRM
L1_007_365G1_scaffold_255_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25860..26312)
DNA (453bp) protein (151aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.57)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C9B8_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERI63986.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_255_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26701..27258)
DNA (558bp) protein (186aa)
ilvH; acetolactate synthase III, thiamin-dependent,small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridiales RepID=G9YNN8_9FIRM
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EHO32851.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying items 1-30 of 81 in total

View Taxonomy