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L1_007_365G1_scaffold_257

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_257_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..118
DNA (117bp) protein (39aa)
Resolvase, N-terminal domain protein n=2 Tax=Firmicutes RepID=D4CAH2_9CLOT
Site-specific recombinases, DNA invertase Pin homologs
Recombinase {ECO:0000313|EMBL:ERI71866.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L1_007_365G1_scaffold_257_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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278..586
DNA (309bp) protein (103aa)
PTS system, Fru family, IIB component n=11 Tax=Clostridium RepID=N9WRH1_9CLOT
PTS system, Fru family, IIB component {ECO:0000313|EMBL:ENZ65808.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
PTS system fructose-specific transporter subunit IIB
L1_007_365G1_scaffold_257_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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618..1721
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMY3_9CLOT
PTS system fructose-specific EIIBC component {ECO:0000313|EMBL:KJJ77522.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
PTS system fructose subfamily transporter subunit IIC
L1_007_365G1_scaffold_257_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1747..2631
DNA (885bp) protein (295aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57247.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_007_365G1_scaffold_257_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2691..4655
DNA (1965bp) protein (655aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97156.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_007_365G1_scaffold_257_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4668..5117
DNA (450bp) protein (150aa)
PTS system, fructose subfamily, IIA component n=9 Tax=Clostridium RepID=N9XIK3_9CLOT
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:ENZ13752.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L1_007_365G1_scaffold_257_7
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5163..6314
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HMY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE97158.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Alcohol dehydrogenase, class IV
L1_007_365G1_scaffold_257_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6329..7345
DNA (1017bp) protein (339aa)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
5-dehydro-2-deoxygluconokinase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILH4_9CLOT
myo-inositol catabolism protein IolC
L1_007_365G1_scaffold_257_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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7404..8078
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57241.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Ribose/galactose isomerase
L1_007_365G1_scaffold_257_10
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8107..8880
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PSV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EXG83818.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L1_007_365G1_scaffold_257_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8911..10032
DNA (1122bp) protein (374aa)
gldA; glycerol dehydrogenase GldA (EC:1.1.1.6)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39651.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_257_12
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10461..14933
DNA (4473bp) protein (1491aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBZ5_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEG31056.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Suppressor of fused protein (SUFU).
L1_007_365G1_scaffold_257_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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15036..15572
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridium RepID=B6FK22_9CLOT
Rubrerythrin {ECO:0000313|EMBL:EEA83634.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Rubrerythrin
L1_007_365G1_scaffold_257_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15771..16673
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridiales RepID=U2CB28_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERI81193.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Transcriptional regulator
L1_007_365G1_scaffold_257_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16828..18444
DNA (1617bp) protein (539aa)
Nickel ABC transporter, periplasmic nickel-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BSQ8_9CLOT
Nickel ABC transporter, periplasmic nickel-binding protein {ECO:0000313|EMBL:ERI81194.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
nickel ABC transporter, periplasmic nickel-binding protein
L1_007_365G1_scaffold_257_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18465..19403
DNA (939bp) protein (313aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1L3_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBL00162.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_007_365G1_scaffold_257_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19407..20231
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CFU3_9FIRM
Putative nickel ABC transporter, permease subunit NikC {ECO:0000313|EMBL:ERI81196.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_365G1_scaffold_257_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20228..21058
DNA (831bp) protein (277aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2DIC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32316.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L1_007_365G1_scaffold_257_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21051..21848
DNA (798bp) protein (266aa)
Oligopeptide ABC transporter, ATP-binding protein OppF family protein n=2 Tax=Clostridiales RepID=U2CB31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32315.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_007_365G1_scaffold_257_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21845..22816
DNA (972bp) protein (324aa)
Succinylglutamate desuccinylase/aspartoacylase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5J1_9FIRM
Succinylglutamate desuccinylase/aspartoacylase family protein {ECO:0000313|EMBL:EDS13224.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Predicted deacylase
L1_007_365G1_scaffold_257_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23287..24603
DNA (1317bp) protein (439aa)
CitMHS family citrate-divalent cation:proton (H+) symporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5J609_9CLOT
CitMHS family citrate-divalent cation:proton (H+) symporter {ECO:0000313|EMBL:CCY44466.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
citrate transporter, CitMHS family
L1_007_365G1_scaffold_257_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24702..25637
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44468.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L1_007_365G1_scaffold_257_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25738..27315
DNA (1578bp) protein (526aa)
Uncharacterized protein Atu5261 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVV8_9CLOT
Uncharacterized protein Atu5261 {ECO:0000313|EMBL:CCY44469.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_257_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27456..28409
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J118_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42711.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Exonuclease RNase T and DNA polymerase III
L1_007_365G1_scaffold_257_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28470..29162)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1A3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42712.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
two component transcriptional regulator
L1_007_365G1_scaffold_257_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29165..30286)
DNA (1122bp) protein (374aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKQ3_9CLOT
integral membrane sensor signal transduction histidine kinase
L1_007_365G1_scaffold_257_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30337..31896)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42714.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L1_007_365G1_scaffold_257_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31907..32599)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IKT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integral membrane protein TIGR01906
L1_007_365G1_scaffold_257_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(32779..34122)
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R6P1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ34434.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_257_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34382..35305)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J122_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42716.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mechanosensitive ion channel protein MscS
Displaying items 1-30 of 73 in total

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