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L1_007_365G1_scaffold_258

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_258_31
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29052..30374
DNA (1323bp) protein (441aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJR3_9FIRM
L1_007_365G1_scaffold_258_32
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30375..30920
DNA (546bp) protein (182aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEG73339.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EEG73339.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3G3_9CLOT
L1_007_365G1_scaffold_258_33
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30922..32190
DNA (1269bp) protein (423aa)
Putative competence-damage inducible protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3G4_9CLOT
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
competence/damage-inducible protein CinA
L1_007_365G1_scaffold_258_34
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32343..33035
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B5H9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76766.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L1_007_365G1_scaffold_258_35
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33056..34066
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68770.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L1_007_365G1_scaffold_258_36
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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34503..35441
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N334_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF07889.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Serine/threonine-protein kinase-like domain
L1_007_365G1_scaffold_258_37
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35820..37418
DNA (1599bp) protein (533aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BCK8_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEG88809.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC-type dipeptide transport system, periplasmic component
L1_007_365G1_scaffold_258_38
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37486..38454
DNA (969bp) protein (323aa)
ABC transporter, permease protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BCK7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG88808.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
L1_007_365G1_scaffold_258_39
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38444..39361
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LAC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84453.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
oppC_4; oligopeptide transport system permease protein OppC
L1_007_365G1_scaffold_258_40
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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39374..40399
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BTT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62516.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_007_365G1_scaffold_258_41
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40392..41384
DNA (993bp) protein (331aa)
ABC transporter ATP-binding protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQI9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB84451.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_007_365G1_scaffold_258_42
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41389..42594
DNA (1206bp) protein (402aa)
PLP-dependent aminotransferase (EC:4.4.1.8)
Possible cystathionine beta-lyase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EEH5_9FIRM
Possible cystathionine beta-lyase {ECO:0000313|EMBL:CDE01339.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L1_007_365G1_scaffold_258_43
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

42873..44180
DNA (1308bp) protein (436aa)
Capsule biosynthesis protein CapA n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WJM7_9FIRM
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:CDC94397.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Bacterial capsule synthesis protein PGA_cap.
L1_007_365G1_scaffold_258_44
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44250..45644
DNA (1395bp) protein (465aa)
ATPase, AAA family n=1 Tax=Clostridium sp. D5 RepID=F0YX31_9CLOT
ATPase, AAA family {ECO:0000313|EMBL:EGB93519.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Recombination protein MgsA
L1_007_365G1_scaffold_258_45
Eubacterium brachy, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45679..47145
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Eubacterium brachy ATCC 33089 RepID=V1CKI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESE30612.1}; TaxID=1321814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium brachy ATCC 33089.;"
Predicted membrane protein
L1_007_365G1_scaffold_258_46
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47243..48691
DNA (1449bp) protein (483aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
Iron only hydrogenase large subunit C-terminal domain n=2 Tax=Roseburia RepID=R6BA39_9FIRM
Iron only hydrogenase large subunit C-terminal domain {ECO:0000313|EMBL:CDA57774.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_007_365G1_scaffold_258_47
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48791..50137)
DNA (1347bp) protein (449aa)
Uracil-xanthine permease n=2 Tax=Clostridium RepID=R5TNG9_9CLOT
Uracil-xanthine permease {ECO:0000313|EMBL:CCZ60511.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
uracil-xanthine permease
L1_007_365G1_scaffold_258_48
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50313..51182
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RP39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50668.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
radical SAM protein
L1_007_365G1_scaffold_258_49
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51223..53334)
DNA (2112bp) protein (704aa)
isoamylase (EC:3.2.1.-)
Glycogen debranching enzyme GlgX n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C4E5_9FIRM
Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ETD21900.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_365G1_scaffold_258_50
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53487..53798)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75646.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
L1_007_365G1_scaffold_258_51
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54002..55561
DNA (1560bp) protein (520aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEG75645.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEG75645.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX47_9CLOT
L1_007_365G1_scaffold_258_52
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55694..56968
DNA (1275bp) protein (425aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Lachnospiraceae RepID=F3AKU9_9FIRM
L1_007_365G1_scaffold_258_53
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57086..58096)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Coprococcus RepID=C0BB43_9FIRM
L1_007_365G1_scaffold_258_54
unknown

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58393..58545
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_365G1_scaffold_258_55
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58679..58912)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NCR8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39590.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_258_56
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59095..59607
DNA (513bp) protein (171aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=S2YBQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86111.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_258_57
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59607..60338
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75639.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_365G1_scaffold_258_58
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

60787..61644
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71554.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Aldo/keto reductases, related to diketogulonate reductase
L1_007_365G1_scaffold_258_59
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61666..63591
DNA (1926bp) protein (642aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ77_9FIRM
L1_007_365G1_scaffold_258_60
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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63645..63959
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WRQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74071.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Domain of Unknown Function (DUF1540).
Displaying items 31-60 of 77 in total

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