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L1_007_365G1_scaffold_268

Search features with annotation key words

Displaying items 121-149 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_268_121
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124153..124644)
DNA (492bp) protein (164aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P0E6_9FIRM
L1_007_365G1_scaffold_268_122
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(124645..125346)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG73322.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L1_007_365G1_scaffold_268_123
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125343..125837)
DNA (495bp) protein (165aa)
Siroheme synthase domain-containing protein n=2 Tax=Coprococcus RepID=S2YN10_9FIRM
Siroheme synthase domain-containing protein {ECO:0000313|EMBL:EPD64825.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
siroheme synthase
L1_007_365G1_scaffold_268_124
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(125834..126160)
DNA (327bp) protein (109aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C9A
Uncharacterized protein {ECO:0000313|EMBL:CDF46306.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L1_007_365G1_scaffold_268_125
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(126261..127733)
DNA (1473bp) protein (491aa)
Stage IV sporulation protein A n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3E2_9CLOT
Stage IV sporulation protein A {ECO:0000313|EMBL:EEG73318.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
stage IV sporulation protein A
L1_007_365G1_scaffold_268_126
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127796..128827)
DNA (1032bp) protein (344aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=3 Tax=Lachnospiraceae RepID=E9RV66_9FIRM
L1_007_365G1_scaffold_268_127
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(128838..129482)
DNA (645bp) protein (215aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C9_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L1_007_365G1_scaffold_268_128
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129486..130814)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPR2_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
ribosome-associated GTPase EngA
L1_007_365G1_scaffold_268_129
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(130816..132144)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86275.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L1_007_365G1_scaffold_268_130
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

132324..133511
DNA (1188bp) protein (396aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EEG73302.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EEG73302.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C6_9CLOT
L1_007_365G1_scaffold_268_131
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(133553..134611)
DNA (1059bp) protein (353aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Dorea sp. 5-2 RepID=R9MQJ7_9FIRM
L1_007_365G1_scaffold_268_132
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(134631..135644)
DNA (1014bp) protein (338aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Coprococcus RepID=C0BBE2_9FIRM
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:CDB86180.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_007_365G1_scaffold_268_133
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136009..136536)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79369.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L1_007_365G1_scaffold_268_134
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136644..137807)
DNA (1164bp) protein (388aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSH4_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCZ66214.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L1_007_365G1_scaffold_268_135
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(137807..138889)
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RZH2_9CLOT
L1_007_365G1_scaffold_268_136
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(138947..140623)
DNA (1677bp) protein (559aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EDR47945.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EDR47945.1};; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G2Y1_9FIRM
L1_007_365G1_scaffold_268_137
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140642..142312)
DNA (1671bp) protein (557aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C3C1_9CLOT
L1_007_365G1_scaffold_268_138
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142350..143432)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUD1_9FIRM
L1_007_365G1_scaffold_268_139
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143656..143985)
DNA (330bp) protein (110aa)
Preprotein translocase, YajC subunit n=2 Tax=Clostridiales RepID=D4M5M8_9FIRM
preprotein translocase, YajC subunit
Preprotein translocase YajC subunit {ECO:0000313|EMBL:CDC15897.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L1_007_365G1_scaffold_268_140
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144075..145208)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=5 Tax=Clostridiales RepID=A5KQ94_9FIRM
L1_007_365G1_scaffold_268_141
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(145321..146865)
DNA (1545bp) protein (515aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea sp. CAG:317 RepID=R6W645_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CDD06523.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L1_007_365G1_scaffold_268_142
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

147074..148171
DNA (1098bp) protein (366aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=2 Tax=Lachnospiraceae RepID=F7JS95_9FIRM
L1_007_365G1_scaffold_268_143
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

148233..149147
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
pseudouridine synthase, RluA family (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z2S7_9FIRM
L1_007_365G1_scaffold_268_144
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149144..150814)
DNA (1671bp) protein (557aa)
Uridine kinase (EC:2.7.1.48)
Phosphoribulokinase/uridine kinase family protein n=2 Tax=Clostridiales RepID=B0NBC4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38394.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L1_007_365G1_scaffold_268_145
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(150836..151621)
DNA (786bp) protein (262aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RJM3_9CLOT
conserved hypothetical protein TIGR00486
L1_007_365G1_scaffold_268_146
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(151635..152339)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BBA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB84313.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Predicted SAM-dependent methyltransferase
L1_007_365G1_scaffold_268_147
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(152349..153467)
DNA (1119bp) protein (373aa)
RNA polymerase sigma factor SigA n=1 Tax=Dorea sp. CAG:317 RepID=R6W649_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
RNA polymerase, sigma 70 subunit, RpoD
L1_007_365G1_scaffold_268_148
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(153504..155276)
DNA (1773bp) protein (591aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PQH3_9CLOT
L1_007_365G1_scaffold_268_149
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(155394..156878)
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38401.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
Displaying items 121-149 of 149 in total

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