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L1_007_365G1_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_268_1
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=E7FPN2_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EFZ34963.1}; TaxID=525362 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis ATCC 25644.;"
L1_007_365G1_scaffold_268_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(691..951)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13112.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Type I restriction enzyme EcoAI specificity protein
L1_007_365G1_scaffold_268_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(999..1658)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59614.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L1_007_365G1_scaffold_268_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1746..2636)
DNA (891bp) protein (297aa)
Filamentation induced by cAMP protein Fic n=2 Tax=unclassified Lachnospiraceae RepID=E5XI10_9FIRM
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:EFV19051.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_007_365G1_scaffold_268_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3053..3517)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WSD7_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EWC95505.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
L1_007_365G1_scaffold_268_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3765..4382)
DNA (618bp) protein (206aa)
HAD hydrolase, family IIIA n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K9S4_9FIRM
HAD hydrolase, family IIIA {ECO:0000313|EMBL:EOS43001.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L1_007_365G1_scaffold_268_7
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4860..5621)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ15907.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
conserved hypothetical protein
L1_007_365G1_scaffold_268_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5630..5890)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 PF0_9CLOT">RepID=N1ZPF0_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEA83085.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative acyl-CoA N-acyltransferase
L1_007_365G1_scaffold_268_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5907..6299)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83084.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L1_007_365G1_scaffold_268_10
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6762..8240)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9W0H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24462.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Beta-fructosidases (levanase/invertase)
L1_007_365G1_scaffold_268_11
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8227..9255)
DNA (1029bp) protein (343aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Clostridium RepID=A7VG41_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCY60502.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_268_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9248..10747)
DNA (1500bp) protein (500aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9X9R7_9CLOT
L1_007_365G1_scaffold_268_13
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10834..11820)
DNA (987bp) protein (329aa)
Sugar-binding domain protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K653_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:CCY60504.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_007_365G1_scaffold_268_14
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11973..13964)
DNA (1992bp) protein (664aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI0003796F75
Helix-turn-helix family protein {ECO:0000313|EMBL:KFN10739.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
LacI family transcriptional regulator
L1_007_365G1_scaffold_268_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14190..14909)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MHQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70624.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
transcriptional regulator, XRE family
L1_007_365G1_scaffold_268_16
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15197..16510
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70623.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
membrane protein
L1_007_365G1_scaffold_268_17
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16550..17629
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MS36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70622.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Xaa-Pro aminopeptidase
L1_007_365G1_scaffold_268_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17965..18960
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XK12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14775.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_007_365G1_scaffold_268_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19037..20230)
DNA (1194bp) protein (398aa)
Amidohydrolase n=1 Tax=Clostridium bolteae 90B8 RepID=R0B2R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14772.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
amidohydrolase
L1_007_365G1_scaffold_268_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20243..21625)
DNA (1383bp) protein (461aa)
Amidohydrolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YU25_9CLOT
Amidohydrolase {ECO:0000313|EMBL:ENZ15553.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
amidohydrolase
L1_007_365G1_scaffold_268_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21658..22866)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RZ38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14770.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_007_365G1_scaffold_268_22
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23348..24595
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07744.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
alcohol dehydrogenase
L1_007_365G1_scaffold_268_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24616..25995
DNA (1380bp) protein (460aa)
Aldehyde dehydrogenase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K565_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
aldehyde dehydrogenase
L1_007_365G1_scaffold_268_24
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26121..26909)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8STR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP26364.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L1_007_365G1_scaffold_268_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27041..27499
DNA (459bp) protein (153aa)
Transcriptional regulator, AbrB family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C491_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EDS74475.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative Xre family DNA-binding protein
L1_007_365G1_scaffold_268_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27514..28236
DNA (723bp) protein (241aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C492_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS74476.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC transporter
L1_007_365G1_scaffold_268_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28229..29002
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C493_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS74477.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L1_007_365G1_scaffold_268_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29003..30226)
DNA (1224bp) protein (408aa)
[FeFe] hydrogenase H-cluster maturation GTPase HydF n=9 Tax=Clostridium RepID=N9W765_9CLOT
[FeFe] hydrogenase H-cluster maturation GTPase HydF {ECO:0000313|EMBL:ENZ08750.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
small GTP-binding protein
L1_007_365G1_scaffold_268_29
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(30247..31665)
DNA (1419bp) protein (473aa)
Putative thiazole biosynthesis protein ThiH n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BR92_9FIRM
Putative thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDA63479.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
iron-only hydrogenase maturation protein HydG
L1_007_365G1_scaffold_268_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31688..32755)
DNA (1068bp) protein (356aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3S5_9CLOT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEG54006.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
iron-only hydrogenase maturation protein HydE
Displaying items 1-30 of 149 in total

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