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L1_007_365G1_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_314_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

481..1233
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B8K5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32205.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_314_2
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1257..2375
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003608343
Uncharacterized protein {ECO:0000313|EMBL:KHE42702.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
hypothetical protein
L1_007_365G1_scaffold_314_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2426..2599
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037E0273
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75409.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_007_365G1_scaffold_314_4
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2992..3951
DNA (960bp) protein (320aa)
Alanine racemase {ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|SAAS:SAAS00021659};; TaxID=1311 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae.;"
Serine racemase n=3 Tax=Firmicutes RepID=Q6WRY3_ENTFL
amino acid racemase
L1_007_365G1_scaffold_314_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3981..5723)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003689478
Putative radical SAM protein YgiQ {ECO:0000313|EMBL:AFL77707.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
radical SAM protein YgiQ
L1_007_365G1_scaffold_314_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5877..6968)
DNA (1092bp) protein (364aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ribosomal large subunit pseudouridine synthase D n=1 Tax=Alistipes onderdonkii RepID=UPI000375DDD3
RluA family pseudouridine synthase
L1_007_365G1_scaffold_314_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6968..7942)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y648_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24086.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_314_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7955..9028)
DNA (1074bp) protein (358aa)
Putative menaquinone biosynthesis protein SCO4494 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR45_9BACT
Putative menaquinone biosynthesis protein SCO4494 family {ECO:0000313|EMBL:CDD24085.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
menaquinone biosynthesis protein, SCO4494 family
L1_007_365G1_scaffold_314_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9030..10133)
DNA (1104bp) protein (368aa)
Putative permease n=1 Tax=Alistipes sp. CAG:29 RepID=R6XYK1_9BACT
Putative permease {ECO:0000313|EMBL:CDD24084.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
permease
L1_007_365G1_scaffold_314_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10142..11278)
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
queuine tRNA-ribosyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00037BFFD3
tRNA-guanine transglycosylase, queuosine-34-forming
L1_007_365G1_scaffold_314_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11364..12518
DNA (1155bp) protein (385aa)
glycosyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00037C5392
Glycosyl transferase {ECO:0000313|EMBL:CDD24082.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyl transferase family protein
L1_007_365G1_scaffold_314_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12509..13072
DNA (564bp) protein (188aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y645_9BACT
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDD24081.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
sigma-70 family RNA polymerase sigma factor
L1_007_365G1_scaffold_314_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13098..13721
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.170)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR41_9BACT
L1_007_365G1_scaffold_314_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13728..14255
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XYJ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24079.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_314_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14266..14691)
DNA (426bp) protein (142aa)
Thiol:disulfide interchange protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKE4_9BACT
Thiol:disulfide interchange protein {ECO:0000313|EMBL:CDD24078.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
thiol:disulfide interchange protein
L1_007_365G1_scaffold_314_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14730..15761)
DNA (1032bp) protein (344aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.192)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z0T6_9BACT
L1_007_365G1_scaffold_314_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15921..16604
DNA (684bp) protein (228aa)
TonB family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y641_9BACT
TonB family protein {ECO:0000313|EMBL:CDD24076.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
TonB family protein
L1_007_365G1_scaffold_314_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16700..17377
DNA (678bp) protein (226aa)
TonB-dependent receptor n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR36_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:CDD24075.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
TonB family protein
L1_007_365G1_scaffold_314_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17615..18766
DNA (1152bp) protein (384aa)
GTPase HflX n=1 Tax=Alistipes sp. CAG:29 RepID=R6XYJ3_9BACT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
GTP-binding protein HflX
L1_007_365G1_scaffold_314_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18785..19441
DNA (657bp) protein (219aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKD9_9BACT
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:CDD24073.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_007_365G1_scaffold_314_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19734..21572
DNA (1839bp) protein (613aa)
Arylsulfatase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z0T3_9BACT
Arylsulfatase {ECO:0000313|EMBL:CDD24072.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_007_365G1_scaffold_314_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21685..22401
DNA (717bp) protein (239aa)
cation-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036E84CE
Regulator of cell morphogenesis and NO signaling {ECO:0000313|EMBL:CDD24071.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
regulator of cell morphogenesis and NO signaling
L1_007_365G1_scaffold_314_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22398..23003
DNA (606bp) protein (202aa)
LuxR family transcriptional regulator n=1 Tax=Alistipes onderdonkii RepID=UPI00037B5609
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDD24070.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L1_007_365G1_scaffold_314_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23009..23902
DNA (894bp) protein (298aa)
cation transporter n=1 Tax=Alistipes onderdonkii RepID=UPI00037EF09B
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDD24069.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cation diffusion facilitator family transporter
L1_007_365G1_scaffold_314_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24077..24337)
DNA (261bp) protein (87aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Alistipes sp. CAG:29 RepID=R6XKD4_9BACT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_007_365G1_scaffold_314_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24294..24662)
DNA (369bp) protein (123aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Ribonuclease P protein component n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z0T0_9BACT
RNase P protein component
L1_007_365G1_scaffold_314_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24670..25530)
DNA (861bp) protein (287aa)
Putative uroporphyrinogen-III synthase HemD n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y633_9BACT
Putative uroporphyrinogen-III synthase HemD {ECO:0000313|EMBL:CDD24066.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
uroporphyrinogen-III synthase
L1_007_365G1_scaffold_314_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25569..26642)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000370FAE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77680.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_007_365G1_scaffold_314_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26639..27817)
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Histidine kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XR28_9BACT
histidine kinase
L1_007_365G1_scaffold_314_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27827..29491)
DNA (1665bp) protein (555aa)
Peptidase S41 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XYI7_9BACT
Peptidase S41 family {ECO:0000313|EMBL:CDD24064.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
C-terminal processing peptidase
Displaying items 1-30 of 62 in total

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