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L1_007_365G1_scaffold_352

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_352_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1160)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Bacteroides massiliensis RepID=U6RC28_9BACE
transposase
Uncharacterized protein {ECO:0000313|EMBL:EOA54194.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
L1_007_365G1_scaffold_352_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1436..3307
DNA (1872bp) protein (624aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=4 Tax=Bacteroides vulgatus RepID=MNMG_BACV8
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_365G1_scaffold_352_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3367..3891
DNA (525bp) protein (175aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Adenine phosphoribosyltransferase n=6 Tax=Bacteroides RepID=APT_BACV8
L1_007_365G1_scaffold_352_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4121..5941
DNA (1821bp) protein (607aa)
UvrABC system protein C n=2 Tax=Bacteroides vulgatus RepID=A6KZN8_BACV8
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_352_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6099..6551
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
D-tyrosyl-tRNA(Tyr) deacylase n=7 Tax=Bacteroides RepID=DTD_BACV8
D-tyrosyl-tRNA(Tyr) deacylase
L1_007_365G1_scaffold_352_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6524..6871
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=root RepID=R7P0F5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS02842.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_007_365G1_scaffold_352_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6878..7825
DNA (948bp) protein (316aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Deoxyribose-phosphate aldolase n=6 Tax=Bacteroides RepID=C6YZM5_9BACE
deoxyribose-phosphate aldolase
L1_007_365G1_scaffold_352_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8006..8980)
DNA (975bp) protein (325aa)
Octaprenyl-diphosphate synthase n=6 Tax=Bacteroides RepID=A6KZN4_BACV8
octaprenyl-diphosphate synthase
Octaprenyl-diphosphate synthase {ECO:0000313|EMBL:KDS47831.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_352_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9072..11987
DNA (2916bp) protein (972aa)
DNA polymerase I n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZN3_BACV8
DNA polymerase I
DNA polymerase I {ECO:0000313|EMBL:ABR38897.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_352_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12058..12270
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2X9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19220.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_365G1_scaffold_352_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12297..12683
DNA (387bp) protein (129aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KZN2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS33839.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_365G1_scaffold_352_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12884..13987
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=4 Tax=Bacteroides RepID=A6KZN1_BACV8
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_365G1_scaffold_352_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14107..15018
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
2-dehydropantoate 2-reductase n=5 Tax=root RepID=C6YZN1_9BACE
oxidoreductase
L1_007_365G1_scaffold_352_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15015..15836
DNA (822bp) protein (274aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Prolipoprotein diacylglyceryl transferase n=14 Tax=Bacteroides RepID=A6KZM9_BACV8
diacylglyceryl transferase
L1_007_365G1_scaffold_352_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15837..16493
DNA (657bp) protein (219aa)
Chloramphenicol O-acetyltransferase n=2 Tax=Bacteroides vulgatus RepID=D4VA21_BACVU
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EOS02834.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
chloramphenicol acetyltransferase
L1_007_365G1_scaffold_352_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16729..17427)
DNA (699bp) protein (233aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6KZM7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79609.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L1_007_365G1_scaffold_352_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17736..17981)
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6YZN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS47841.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_365G1_scaffold_352_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18098..19753)
DNA (1656bp) protein (552aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VA25_BACVU
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFG17028.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_365G1_scaffold_352_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20320..21009)
DNA (690bp) protein (230aa)
Outer membrane insertion signal domain protein n=4 Tax=Bacteroides RepID=C6YZN8_9BACE
Outer membrane insertion C-terminal signal domain protein {ECO:0000313|EMBL:KDS47845.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
histidine kinase
L1_007_365G1_scaffold_352_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21144..22811)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KZM4_BACV8
TPR repeat family protein {ECO:0000313|EMBL:KDS47846.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_365G1_scaffold_352_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22854..23441)
DNA (588bp) protein (196aa)
Outer membrane insertion signal domain protein n=6 Tax=Bacteroides RepID=C6YZP0_9BACE
Autotransporter beta-domain protein {ECO:0000313|EMBL:KDS47847.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_365G1_scaffold_352_22
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23649..25628)
DNA (1980bp) protein (660aa)
Glycosyl hydrolase family 20, catalytic domain protein n=5 Tax=root RepID=C6YZP1_9BACE
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EET14109.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
glycoside hydrolase
L1_007_365G1_scaffold_352_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25678..28263)
DNA (2586bp) protein (862aa)
DNA mismatch repair protein MutS n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VA32_BACVU
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
DNA mismatch repair protein MutS
L1_007_365G1_scaffold_352_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28409..28915
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VA33_BACVU
Flavin reductase like domain protein {ECO:0000313|EMBL:KDS47851.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L1_007_365G1_scaffold_352_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29251..32505
DNA (3255bp) protein (1085aa)
WD40-like protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VA34_BACVU
Peptidase S41 family protein {ECO:0000313|EMBL:KDS56947.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
peptidase/protease
L1_007_365G1_scaffold_352_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32630..33922)
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Tyrosine--tRNA ligase n=6 Tax=Bacteroides RepID=SYY_BACV8
tyrosyl-tRNA synthetase 1
L1_007_365G1_scaffold_352_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34002..34631)
DNA (630bp) protein (210aa)
Hydrolase, TatD family n=4 Tax=Bacteroides RepID=C6YZP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79622.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
TatD-related DNase
L1_007_365G1_scaffold_352_28
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34646..34867)
DNA (222bp) protein (74aa)
Putative membrane protein insertion efficiency factor n=13 Tax=Bacteroides RepID=YIDD_BACV8
membrane protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_365G1_scaffold_352_29
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34864..35256)
DNA (393bp) protein (131aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Ribonuclease P protein component n=6 Tax=Bacteroides RepID=A6KZL5_BACV8
L1_007_365G1_scaffold_352_30
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35359..36108)
DNA (750bp) protein (250aa)
Uroporphyrinogen-III synthase n=8 Tax=Bacteroides RepID=C3Q4S4_9BACE
uroporphyrinogen-III synthase
Uncharacterized protein {ECO:0000313|EMBL:CDB36459.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
Displaying items 1-30 of 60 in total

View Taxonomy