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L1_007_365G1_scaffold_353

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_353_1
unknown

Not on your lists

3..83
DNA (81bp) protein (27aa)

This feature has no annotations

L1_007_365G1_scaffold_353_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1017..2132
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78513.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GntR family transcriptional regulator
L1_007_365G1_scaffold_353_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2240..2431
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78514.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_353_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2693..2887
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78515.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_353_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2994..3323
DNA (330bp) protein (110aa)
Rhodanese-related sulfurtransferase (EC:2.8.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V521_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78516.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_353_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3374..4558
DNA (1185bp) protein (395aa)
Nucleic acid methylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCQ0_9FIRM
Nucleic acid methylase {ECO:0000313|EMBL:CCZ78517.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted N6-adenine-specific DNA methylase
L1_007_365G1_scaffold_353_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4562..6265
DNA (1704bp) protein (568aa)
Cell surface protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJT6_9FIRM
Cell surface protein {ECO:0000313|EMBL:CCZ78518.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cell surface protein
L1_007_365G1_scaffold_353_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6267..7319
DNA (1053bp) protein (351aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5US31_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCZ78519.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_353_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7321..7950
DNA (630bp) protein (210aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKK9_9FIRM
ribonuclease Ph
L1_007_365G1_scaffold_353_10
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8693..9178
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41919.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
diguanylate cyclase
L1_007_365G1_scaffold_353_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9287..10654)
DNA (1368bp) protein (456aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT22_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ78854.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L1_007_365G1_scaffold_353_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11404..12315
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78853.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_353_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12340..13428
DNA (1089bp) protein (363aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0N6_ROSHA
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEN95718.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_353_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13441..14457
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78220.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_353_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14447..15499
DNA (1053bp) protein (351aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0N8_ROSHA
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN95720.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_353_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..17285
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78222.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_353_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17357..17653)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78223.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_353_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17751..18476
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25572.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_365G1_scaffold_353_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18495..19058
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25574.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_007_365G1_scaffold_353_20
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19059..19511)
DNA (453bp) protein (151aa)
Adenylate cyclase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFF4_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDA25575.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
adenylate cyclase
L1_007_365G1_scaffold_353_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19523..20398)
DNA (876bp) protein (292aa)
LysR family transcriptional regulator, transcription activator of glutamate synthase operon n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SZB8_ROSHA
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
LysR family transcriptional regulator, transcription activator of glutamate synthase operon {ECO:0000313|EMBL:AEN95357.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_353_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20544..21092
DNA (549bp) protein (183aa)
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ43_9FIRM
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein {ECO:0000313|EMBL:CCZ77899.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein
L1_007_365G1_scaffold_353_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21261..21476
DNA (216bp) protein (72aa)
Small acid-soluble spore proteins alpha/beta type n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIN0_9FIRM
Small acid-soluble spore proteins alpha/beta type {ECO:0000313|EMBL:CCZ77900.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_353_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21686..23023
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Trigger factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3C7_9FIRM
trigger factor
L1_007_365G1_scaffold_353_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23135..23716
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB08_9FIRM
ATP-dependent Clp protease, proteolytic subunit ClpP
L1_007_365G1_scaffold_353_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23777..25063
DNA (1287bp) protein (429aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGF0_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L1_007_365G1_scaffold_353_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25103..27418
DNA (2316bp) protein (772aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lon protease n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIN6_9FIRM
ATP-dependent protease La
L1_007_365G1_scaffold_353_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27452..28198
DNA (747bp) protein (249aa)
Probable GTP-binding protein EngB n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3D2_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GTPase EngB
L1_007_365G1_scaffold_353_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28257..29165
DNA (909bp) protein (303aa)
ABC-type metal ion transport system periplasmic component/surface adhesin n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB14_9FIRM
ABC-type metal ion transport system periplasmic component/surface adhesin {ECO:0000313|EMBL:CCZ77907.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L1_007_365G1_scaffold_353_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29149..29922
DNA (774bp) protein (258aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI20_9FIRM
ABC-type Mn/Zn transport systems ATPase component {ECO:0000313|EMBL:CCZ77908.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Displaying items 1-30 of 63 in total

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