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L1_007_365G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_355_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
Flagellin and related hook-associated proteins n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E2K5_9FIRM
Flagellin and related hook-associated proteins
Uncharacterized protein {ECO:0000313|EMBL:ACR77122.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_007_365G1_scaffold_355_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(315..611)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79006.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Global regulator protein family.
L1_007_365G1_scaffold_355_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

799..1377
DNA (579bp) protein (193aa)
Site-specific recombinase XerD n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULX0_9FIRM
Site-specific recombinase XerD {ECO:0000313|EMBL:CCZ79005.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_355_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1676..2686
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79004.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_355_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2836..3342)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79003.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_355_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3346..4593)
DNA (1248bp) protein (416aa)
Transglutaminase domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VE56_9FIRM
Transglutaminase domain-containing protein {ECO:0000313|EMBL:CCZ79002.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_355_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4765..5133)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79001.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, ArsR family
L1_007_365G1_scaffold_355_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5178..7106)
DNA (1929bp) protein (643aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULW3_9FIRM
Cadmium-exporting ATPase {ECO:0000313|EMBL:CCZ79000.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_355_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7149..7367)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78999.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Heavy-metal-associated domain.
L1_007_365G1_scaffold_355_10
unknown

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comp(7444..7677)
DNA (234bp) protein (78aa)

This feature has no annotations

L1_007_365G1_scaffold_355_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7839..8297)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78995.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Rubrerythrin.
L1_007_365G1_scaffold_355_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8498..9874
DNA (1377bp) protein (459aa)
Transporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTH1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Na+-dependent transporters of the SNF family
L1_007_365G1_scaffold_355_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9887..10882
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UL41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78993.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L1_007_365G1_scaffold_355_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10938..14507)
DNA (3570bp) protein (1190aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VE12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78992.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
adhesin-like protein
L1_007_365G1_scaffold_355_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14645..15424)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78991.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_355_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15421..16257)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78990.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L1_007_365G1_scaffold_355_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16385..17638)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78989.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative sensor histidine kinase
L1_007_365G1_scaffold_355_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17635..18354)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VE05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78987.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LytTR family two component transcriptional regulator
L1_007_365G1_scaffold_355_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18382..19437)
DNA (1056bp) protein (352aa)
3-dehydroquinate synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6B6_9FIRM
3-dehydroquinate synthase {ECO:0000313|EMBL:CCZ78986.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycerol dehydrogenase and related enzymes
L1_007_365G1_scaffold_355_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19621..23745)
DNA (4125bp) protein (1375aa)
Glycosyl hydrolase family 26 n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULP9_9FIRM
Glycosyl hydrolase family 26 {ECO:0000313|EMBL:CCZ79233.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Beta-mannanase
L1_007_365G1_scaffold_355_21
unknown

Not on your lists

comp(24085..24282)
DNA (198bp) protein (66aa)
Nucleotidyltransferase domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHK7_9FIRM
L1_007_365G1_scaffold_355_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24394..25383)
DNA (990bp) protein (330aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPN5_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L1_007_365G1_scaffold_355_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25516..26361)
DNA (846bp) protein (282aa)
ABC transporter transmembrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI88_9FIRM
ABC transporter transmembrane protein {ECO:0000313|EMBL:CCZ77750.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter transmembrane protein
L1_007_365G1_scaffold_355_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26362..27273)
DNA (912bp) protein (304aa)
Sugar ABC transporter inner membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2Y1_9FIRM
Sugar ABC transporter inner membrane protein {ECO:0000313|EMBL:CCZ77751.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar ABC transporter inner membrane protein
L1_007_365G1_scaffold_355_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27281..28501)
DNA (1221bp) protein (407aa)
Extracellular solute-binding protein family 1 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM0_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCZ77752.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
family 1 extracellular solute-binding protein
L1_007_365G1_scaffold_355_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28516..29589)
DNA (1074bp) protein (358aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UHL3_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L1_007_365G1_scaffold_355_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29592..30245)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UPN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77754.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L1_007_365G1_scaffold_355_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30448..31431)
DNA (984bp) protein (328aa)
LacI family transcription regulator n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI90_9FIRM
LacI family transcription regulator {ECO:0000313|EMBL:CCZ77755.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
LacI family transcription regulator
L1_007_365G1_scaffold_355_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31588..33900)
DNA (2313bp) protein (771aa)
Mannose-6-phosphate isomerase class I/beta-galactosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V2Y5_9FIRM
Mannose-6-phosphate isomerase class I/beta-galactosidase {ECO:0000313|EMBL:CCZ77756.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
mannose-6-phosphate isomerase, class I/beta-galactosidase
L1_007_365G1_scaffold_355_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33914..35020)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VAM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77757.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lysophospholipase L1 and related esterases
Displaying items 1-30 of 63 in total

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