ggKbase home page

L1_007_365G1_scaffold_370

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_370_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(389..3214)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZJ4_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
excinuclease ABC, A subunit
L1_007_365G1_scaffold_370_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3325..3720)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42189.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_370_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3832..5715)
DNA (1884bp) protein (628aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJE0_9CLOT
L1_007_365G1_scaffold_370_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6011..6760)
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6E9_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG53091.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter
L1_007_365G1_scaffold_370_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6750..7442)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42194.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_370_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7688..8512)
DNA (825bp) protein (275aa)
Putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJQ9_9FIRM
Putative glutamine ABC transporter, periplasmic glutamine-binding protein GlnH {ECO:0000313|EMBL:EEQ57935.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L1_007_365G1_scaffold_370_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8652..9494)
DNA (843bp) protein (281aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZL5_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L1_007_365G1_scaffold_370_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9534..10220)
DNA (687bp) protein (229aa)
Methenyltetrahydrofolate cyclohydrolase n=2 Tax=Clostridium bolteae RepID=N9ZWF7_9CLOT
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:ENZ49773.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
formiminotransferase-cyclodeaminase
L1_007_365G1_scaffold_370_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10426..10659
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42200.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L1_007_365G1_scaffold_370_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10654..11382)
DNA (729bp) protein (243aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RJU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18671.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
PHP domain-containing protein
L1_007_365G1_scaffold_370_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11379..11711)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53081.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L1_007_365G1_scaffold_370_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11708..13108)
DNA (1401bp) protein (467aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98409.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Fe-S cluster domain-containing protein
L1_007_365G1_scaffold_370_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13122..13544)
DNA (423bp) protein (141aa)
Anti-sigma regulatory factor, serine/threonine protein kinase n=4 Tax=Clostridium RepID=N9Z3X2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98191.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
anti-sigma regulatory factor, serine/threonine protein kinase
L1_007_365G1_scaffold_370_14
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13573..13920)
DNA (348bp) protein (116aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YRS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98190.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
DRTGG domain-containing protein
L1_007_365G1_scaffold_370_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14163..14657
DNA (495bp) protein (165aa)
Respiratory-chain NADH dehydrogenase 24 Kd subunit n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6G9_9CLOT
Respiratory-chain NADH dehydrogenase 24 Kd subunit {ECO:0000313|EMBL:EEG53085.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NADH dehydrogenase (ubiquinone) 24 kDa subunit
L1_007_365G1_scaffold_370_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14661..15218
DNA (558bp) protein (186aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RJU1_9CLOT
histidine kinase
L1_007_365G1_scaffold_370_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15251..15628
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ57956.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_007_365G1_scaffold_370_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15644..17434
DNA (1791bp) protein (597aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit F n=7 Tax=Clostridium RepID=N9Z3X4_9CLOT
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:ENZ14697.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L1_007_365G1_scaffold_370_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17452..19197
DNA (1746bp) protein (582aa)
NADP-reducing hydrogenase subunit HndC {ECO:0000313|EMBL:KJJ73375.1}; EC=1.12.1.3 {ECO:0000313|EMBL:KJJ73375.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJJ0_9CLOT
hydrogenase, Fe-only
L1_007_365G1_scaffold_370_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19536..20096)
DNA (561bp) protein (187aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEU97417.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEU97417.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Antioxidant, AhpC/TSA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H485_9FIRM
alkyl hydroperoxide reductase
L1_007_365G1_scaffold_370_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20126..21334)
DNA (1209bp) protein (403aa)
PLP-dependent aminotransferase (EC:4.4.1.8)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RUJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL68402.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_365G1_scaffold_370_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21374..22597)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CCD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33702.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_365G1_scaffold_370_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22656..23987)
DNA (1332bp) protein (444aa)
Amino acid permease-associated region n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH70_9CLOT
Amino acid permease-associated region {ECO:0000313|EMBL:CCY41420.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid permease
L1_007_365G1_scaffold_370_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24471..24971
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57348.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Transcriptional regulators
L1_007_365G1_scaffold_370_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25135..26676
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42204.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SPFH domain/band 7 family protein
L1_007_365G1_scaffold_370_26
Bacillus halodurans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26774..29080)
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0002E1DF04
hypothetical protein
BH1116 protein {ECO:0000313|EMBL:BAB04835.1}; TaxID=272558 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM; 9153 / C-125).;"
L1_007_365G1_scaffold_370_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29366..31807)
DNA (2442bp) protein (814aa)
Histidine kinase A domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJT9_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:EEQ57965.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
integral membrane sensor signal transduction histidine kinase
L1_007_365G1_scaffold_370_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31779..32489)
DNA (711bp) protein (237aa)
Response regulator receiver domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EJU0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEQ57966.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
winged helix family two component transcriptional regulator
L1_007_365G1_scaffold_370_29
unknown

Not on your lists

comp(32584..32676)
DNA (93bp) protein (31aa)

This feature has no annotations

L1_007_365G1_scaffold_370_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32704..35076)
DNA (2373bp) protein (791aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K2E5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00444.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 57 in total

View Taxonomy