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L1_007_365G1_scaffold_380

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_380_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..897
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0C4_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95919.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_2
unknown

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983..1195
DNA (213bp) protein (71aa)

This feature has no annotations

L1_007_365G1_scaffold_380_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1134..2021)
DNA (888bp) protein (296aa)
L-rhamnose operon transcriptional activator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0C5_ROSHA
L-rhamnose operon transcriptional activator
L-rhamnose operon transcriptional activator {ECO:0000313|EMBL:AEN95920.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2197..4449
DNA (2253bp) protein (751aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Phosphorylase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0C6_ROSHA
glycosyltransferase family glucan phosphorylase
L1_007_365G1_scaffold_380_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4594..5676
DNA (1083bp) protein (361aa)
Renal dipeptidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0C7_ROSHA
dipeptidase
Renal dipeptidase {ECO:0000313|EMBL:AEN95922.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5791..6936
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0C8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95923.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6949..8193
DNA (1245bp) protein (415aa)
GTPase HflX n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D0_ROSHA
small GTP-binding protein domain containing protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8236..9567
DNA (1332bp) protein (444aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Dihydroorotase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D1_ROSHA
dihydroorotase
L1_007_365G1_scaffold_380_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9574..10350
DNA (777bp) protein (259aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D2_ROSHA
dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain containing protein
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10350..11258
DNA (909bp) protein (303aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Dihydroorotate dehydrogenase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D3_ROSHA
L1_007_365G1_scaffold_380_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11312..12256
DNA (945bp) protein (315aa)
Ion transport protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D4_ROSHA
ion transport protein
Ion transport protein {ECO:0000313|EMBL:AEN95929.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12270..13133
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D5_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95930.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_13
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13261..13842
DNA (582bp) protein (194aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NNL2_9CLOT
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:CCZ05790.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L1_007_365G1_scaffold_380_14
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13839..15311
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NUD7_9CLOT
integral membrane sensor signal transduction histidine kinase
L1_007_365G1_scaffold_380_15
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15453..16175
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5NPN6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CCZ05788.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
srrA3; transcriptional regulatory protein SrrA
L1_007_365G1_scaffold_380_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16491..17528
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A694_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23751.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Glycosyltransferases involved in cell wall biogenesis
L1_007_365G1_scaffold_380_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17544..18128
DNA (585bp) protein (195aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26170.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_007_365G1_scaffold_380_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18118..19152
DNA (1035bp) protein (345aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26169.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_007_365G1_scaffold_380_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19155..20021)
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U2_ROSHA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEN95936.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20330..21124
DNA (795bp) protein (265aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:AEN95937.1}; EC=1.1.1.69 {ECO:0000313|EMBL:AEN95937.1};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Gluconate 5-dehydrogenase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U3_ROSHA
L1_007_365G1_scaffold_380_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21325..23520
DNA (2196bp) protein (732aa)
Alpha-L-rhamnosidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U4_ROSHA
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:AEN95938.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23586..25388
DNA (1803bp) protein (601aa)
Beta-galactosidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U5_ROSHA
beta-galactosidase
Beta-galactosidase {ECO:0000313|EMBL:AEN95939.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25408..26274)
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U6_ROSHA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEN95940.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26703..28067
DNA (1365bp) protein (455aa)
Extracellular solute-binding protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U7_ROSHA
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:AEN95941.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28232..29110
DNA (879bp) protein (293aa)
ABC transporter inner membrane protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U8_ROSHA
ABC transporter inner membrane protein
ABC transporter inner membrane protein {ECO:0000313|EMBL:AEN95942.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29103..29909
DNA (807bp) protein (269aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0U9_ROSHA
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEN95943.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29909..30346
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0V0_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95944.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30297..31598
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0V1_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95945.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31644..33806
DNA (2163bp) protein (721aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0V2_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95946.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_365G1_scaffold_380_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33830..35428)
DNA (1599bp) protein (533aa)
AraC family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0V3_ROSHA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEN95947.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying items 1-30 of 56 in total

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