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L1_007_365G1_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_401_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..396
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HJH9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EFV66079.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L1_007_365G1_scaffold_401_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

427..1617
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3M9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18942.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
thiol:disulfide interchange protein
L1_007_365G1_scaffold_401_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1639..3747
DNA (2109bp) protein (703aa)
Thioredoxin n=2 Tax=Bacteroides vulgatus RepID=D4V8U6_BACVU
Putative thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:ABR37840.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
thiol:disulfide interchange protein DsbE
L1_007_365G1_scaffold_401_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3959..4555
DNA (597bp) protein (199aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides RepID=A6KWM5_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR37839.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_401_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4684..5658
DNA (975bp) protein (325aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides vulgatus RepID=D4V8U4_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR37838.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_401_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5787..9188
DNA (3402bp) protein (1134aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IAM6_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37837.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L1_007_365G1_scaffold_401_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9206..11017
DNA (1812bp) protein (604aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides vulgatus RepID=A6KWM2_BACV8
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS26439.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L1_007_365G1_scaffold_401_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11014..11205)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS26392.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_365G1_scaffold_401_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11245..12795
DNA (1551bp) protein (517aa)
Glycosyl hydrolase {ECO:0000313|EMBL:KDS26467.1}; EC=3.2.1.- {ECO:0000313|EMBL:KDS26467.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glycosyl hydrolase family 109 protein 4 n=2 Tax=Bacteroides vulgatus RepID=G1094_BACV8
oxidoreductase
L1_007_365G1_scaffold_401_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13156..14934
DNA (1779bp) protein (593aa)
Alpha-1,3-galactosidase B n=2 Tax=Bacteroides vulgatus RepID=GLAB1_BACV8
Putative alpha-1,3-galactosidase B {ECO:0000313|EMBL:EFG17753.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
ATP/GTP-binding site
L1_007_365G1_scaffold_401_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15190..15963
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWL9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR37833.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_401_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16010..16120)
DNA (111bp) protein (37aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UMP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04095.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_365G1_scaffold_401_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16141..18180)
DNA (2040bp) protein (680aa)
Glycoside hydrolase family 29, candidate alpha-L-fucosidase n=2 Tax=Bacteroides vulgatus RepID=A6KWL8_BACV8
Alpha-L-fucosidase family protein {ECO:0000313|EMBL:KDS26418.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alpha-L-fucosidase
L1_007_365G1_scaffold_401_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18189..19091)
DNA (903bp) protein (301aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=4 Tax=Bacteroides RepID=C6Z354_9BACE
L1_007_365G1_scaffold_401_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19143..19706)
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6KWL6_BACV8
hypothetical protein
Plasmid pRiA4b ORF-3-like family protein {ECO:0000313|EMBL:KDS54644.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_401_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19769..20536)
DNA (768bp) protein (256aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=7 Tax=Bacteroides RepID=A6KWL5_BACV8
L1_007_365G1_scaffold_401_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20553..21938)
DNA (1386bp) protein (462aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=6 Tax=root RepID=C6Z351_9BACE
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase
L1_007_365G1_scaffold_401_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21944..22984)
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
UDP-3-O-acylglucosamine N-acyltransferase n=6 Tax=Bacteroides RepID=LPXD_BACV8
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
L1_007_365G1_scaffold_401_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23117..24352)
DNA (1236bp) protein (412aa)
Phosphohydrolase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWL2_BACV8
phosphohydrolase
Phosphohydrolase {ECO:0000313|EMBL:KDS54640.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_401_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24441..25259)
DNA (819bp) protein (273aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Orotidine 5'-phosphate decarboxylase n=15 Tax=Bacteroides RepID=PYRF_BACV8
orotidine 5'-phosphate decarboxylase
L1_007_365G1_scaffold_401_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25296..26411)
DNA (1116bp) protein (372aa)
Peptide chain release factor 1 n=7 Tax=Bacteroides RepID=A6KWL0_BACV8
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_365G1_scaffold_401_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26654..27823)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z345_9BACE
phosphoribosylformylglycinamidine cyclo-ligase
Putative phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:CDF18955.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_365G1_scaffold_401_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29062..29655
DNA (594bp) protein (198aa)
Uncharacterized protein n=4 Tax=Bacteroides vulgatus RepID=A6KWK7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04084.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L1_007_365G1_scaffold_401_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29658..30656
DNA (999bp) protein (333aa)
Toxin-antitoxin system, toxin component, Fic family n=4 Tax=Bacteroides RepID=D4V8S7_BACVU
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABR37820.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L1_007_365G1_scaffold_401_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30624..30839)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZQ34_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF18958.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L1_007_365G1_scaffold_401_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31005..32684)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S6_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17739.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L1_007_365G1_scaffold_401_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32763..34193
DNA (1431bp) protein (477aa)
Carbon starvation protein A n=5 Tax=Bacteroides RepID=A6KWK4_BACV8
carbon starvation protein A
Carbon starvation CstA family protein {ECO:0000313|EMBL:KDS54631.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L1_007_365G1_scaffold_401_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34180..34401
DNA (222bp) protein (74aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6KWK3_BACV8
membrane protein
Putative membrane protein {ECO:0000313|EMBL:KDS26376.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L1_007_365G1_scaffold_401_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34420..34911
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V8S3_BACVU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG17736.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L1_007_365G1_scaffold_401_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35021..37327)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZQ39_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY77675.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
beta-N-acetylhexosaminidase
Displaying items 1-30 of 45 in total

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