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L1_007_365G1_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_403_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(409..1191)
-----------------
DNA (783bp)
protein (261aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N144_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDS19525.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L1_007_365G1_scaffold_403_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1355..1882)
-----------------
DNA (528bp)
protein (176aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
nrdG3; anaerobic ribonucleoside triphosphate reductase activating protein NrdG3 (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=3 Tax=Erysipelotrichaceae RepID=B0N1A6_9FIRM
L1_007_365G1_scaffold_403_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1885..4044)
-----------------
DNA (2160bp)
protein (720aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Coprobacillus RepID=C3RH03_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EHM94143.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_403_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4387..6504
-----------------
DNA (2118bp)
protein (706aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Erysipelotrichaceae RepID=B0N1A8_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCZ35636.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6504..6998
-----------------
DNA (495bp)
protein (165aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=5 Tax=Erysipelotrichaceae RepID=B0N1A9_9FIRM
L1_007_365G1_scaffold_403_6
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7022..7681)
-----------------
DNA (660bp)
protein (220aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N1B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35638.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cyclic nucleotide-binding protein
L1_007_365G1_scaffold_403_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7763..8182
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AN74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45722.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_403_8
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8179..8637
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N146_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94138.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_365G1_scaffold_403_9
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8936..10267)
-----------------
DNA (1332bp)
protein (444aa)
MATE efflux family protein n=2 Tax=Coprobacillus RepID=G9QWP9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM94137.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_365G1_scaffold_403_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10469..11149
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RGZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35642.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_365G1_scaffold_403_11
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11159..12016)
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QWP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94135.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
RpiR family transcriptional regulator
L1_007_365G1_scaffold_403_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12275..12472)
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QWP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94134.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_403_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12555..12737)
-----------------
DNA (183bp)
protein (61aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N150_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45727.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_365G1_scaffold_403_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12840..13484)
-----------------
DNA (645bp)
protein (215aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RGZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35647.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13507..13809)
-----------------
DNA (303bp)
protein (101aa)
Phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Erysipelotrichaceae RepID=B0N152_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHM94131.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_403_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13821..14138)
-----------------
DNA (318bp)
protein (106aa)
celA3; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Erysipelotrichaceae RepID=B0N153_9FIRM
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:EHM94130.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_403_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14377..15222)
-----------------
DNA (846bp)
protein (282aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N154_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35655.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_18
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15339..16283)
-----------------
DNA (945bp)
protein (315aa)
csbB; putative glycosyltransferase CsbB (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein n=5 Tax=Erysipelotrichaceae RepID=B0N155_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CCZ35656.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16270..16677)
-----------------
DNA (408bp)
protein (136aa)
GtrA-like protein n=4 Tax=Erysipelotrichaceae RepID=B0N156_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35657.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_365G1_scaffold_403_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16649..19090)
-----------------
DNA (2442bp)
protein (814aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QWW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94126.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_365G1_scaffold_403_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19231..19932
-----------------
DNA (702bp)
protein (234aa)
Response regulator receiver domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N158_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35660.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
two component transcriptional regulator, winged helix family
L1_007_365G1_scaffold_403_22
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19925..21253
-----------------
DNA (1329bp)
protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Histidine kinase A domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N159_9FIRM
signal transduction histidine kinase
L1_007_365G1_scaffold_403_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21297..21809
-----------------
DNA (513bp)
protein (171aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=5 Tax=Erysipelotrichaceae RepID=B0N160_9FIRM
DUTP diphosphatase {ECO:0000313|EMBL:CCZ35665.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21850..22086)
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N161_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35666.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_25
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22248..23777
-----------------
DNA (1530bp)
protein (510aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AN91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45739.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_365G1_scaffold_403_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24780..25604)
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N165_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94268.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_403_27
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25606..26274)
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AN94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45742.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ABC-type multidrug transport system
L1_007_365G1_scaffold_403_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26372..27073)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RA62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35674.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L1_007_365G1_scaffold_403_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27186..28964)
-----------------
DNA (1779bp)
protein (593aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RJ28_9FIRM
ABC transporter {ECO:0000313|EMBL:CCZ35676.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_403_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28957..30687)
-----------------
DNA (1731bp)
protein (577aa)
ABC transporter, ATP-binding protein n=4 Tax=Erysipelotrichaceae RepID=B0N169_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35677.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ABC transporter family protein
Displaying items 1-30 of 80 in total

View Taxonomy