ggKbase home page

L1_007_365G1_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_406_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3..158)
DNA (156bp) protein (52aa)
50S ribosomal protein L33 n=70 Tax=Bacteroidales RepID=RL33_BACFN
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L1_007_365G1_scaffold_406_2
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(180..440)
DNA (261bp) protein (87aa)
50S ribosomal protein L28 n=9 Tax=Bacteroides RepID=D6D6Q8_9BACE
LSU ribosomal protein L28P
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L1_007_365G1_scaffold_406_3
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(518..1750)
DNA (1233bp) protein (411aa)
CinA-like protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LYL6_9BACE
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
competence/damage-inducible protein cinA
L1_007_365G1_scaffold_406_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1790..2809)
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=5 Tax=Bacteroides RepID=C3QD97_9BACE
L1_007_365G1_scaffold_406_5
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3010..7464
DNA (4455bp) protein (1485aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D4WUX2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO49930.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Family of unknown function (DUF490).
L1_007_365G1_scaffold_406_6
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7409..7513)
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UKY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX26088.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L1_007_365G1_scaffold_406_7
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7556..8413)
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QD95_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ03989.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Protein of unknown function (DUF2874).
L1_007_365G1_scaffold_406_8
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8435..8872)
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QD94_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO49928.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Protein of unknown function (DUF2874).
L1_007_365G1_scaffold_406_9
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9192..10343
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C558_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29328.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
NPCBM-associated, NEW3 domain of alpha-galactosidase.
L1_007_365G1_scaffold_406_10
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10344..11090
DNA (747bp) protein (249aa)
Bacitracin ABC transporter, ATP-binding protein BcrA n=6 Tax=Bacteroides RepID=C3QD92_9BACE
Bacitracin ABC transporter, ATP-binding protein BcrA {ECO:0000313|EMBL:EEO49926.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
ABC-type multidrug transport system, ATPase component
L1_007_365G1_scaffold_406_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11062..12039
DNA (978bp) protein (326aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QD91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN01960.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
ABC-type transport system involved in multi-copper enzyme maturation, permease component
L1_007_365G1_scaffold_406_12
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12171..13445)
DNA (1275bp) protein (425aa)
Histidine kinase A domain protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KWQ8_9BACE
Histidine kinase A domain protein {ECO:0000313|EMBL:EEX45513.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
Signal transduction histidine kinase
L1_007_365G1_scaffold_406_13
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13468..14145)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=3 Tax=Bacteroides RepID=C9KWQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92220.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_365G1_scaffold_406_14
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14357..15850)
DNA (1494bp) protein (498aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
Proline--tRNA ligase n=10 Tax=Bacteroides RepID=D6D6P7_9BACE
L1_007_365G1_scaffold_406_15
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16361..17773
DNA (1413bp) protein (471aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=D6D6P6_9BACE
Outer membrane protein
Outer membrane efflux protein {ECO:0000313|EMBL:EEZ03981.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L1_007_365G1_scaffold_406_16
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17780..18766
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LYN1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99236.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_007_365G1_scaffold_406_17
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18789..19973
DNA (1185bp) protein (395aa)
ABC-2 type transporter n=2 Tax=Bacteroides xylanisolvens RepID=D4VHE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99237.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
transmembrane protein
L1_007_365G1_scaffold_406_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19957..21129
DNA (1173bp) protein (391aa)
ABC-2 type transporter n=3 Tax=Bacteroides RepID=D0TSJ7_9BACE
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:CDM03592.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L1_007_365G1_scaffold_406_19
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21371..25360
DNA (3990bp) protein (1330aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bacteroides RepID=D0TSJ6_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EGX26089.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
two-component system sensor histidine kinase/response regulator
L1_007_365G1_scaffold_406_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25486..27375)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JK88_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87244.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
TonB-dependent outer membrane receptor
L1_007_365G1_scaffold_406_21
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27406..27825)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UWZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87243.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Domain of unknown function (DUF1893).
L1_007_365G1_scaffold_406_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27834..29237)
DNA (1404bp) protein (468aa)
Predicted oxidoreductases of the aldo/keto reductase family n=2 Tax=Bacteroides RepID=D6D6P3_9BACE
Predicted oxidoreductases of the aldo/keto reductase family
Predicted oxidoreductases of the aldo/keto reductase family {ECO:0000313|EMBL:CBK65688.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_406_23
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29257..30765)
DNA (1509bp) protein (503aa)
4Fe-4S binding domain protein n=5 Tax=Bacteroides RepID=C3QD80_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEO49914.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
4Fe-4S binding domain.
L1_007_365G1_scaffold_406_24
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30955..31425)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AHP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87240.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L1_007_365G1_scaffold_406_25
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31582..34173)
DNA (2592bp) protein (864aa)
Secretin and TonB N terminus short domain protein n=4 Tax=Bacteroides RepID=C3QD78_9BACE
Secretin and TonB N terminus short domain protein {ECO:0000313|EMBL:EEZ03973.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Secretin and TonB N terminus short domain.
L1_007_365G1_scaffold_406_26
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34331..35305)
DNA (975bp) protein (325aa)
Fe2+-dicitrate sensor, membrane component n=6 Tax=Bacteroides RepID=D6D6N9_9BACE
Fe2+-dicitrate sensor, membrane component
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEO49911.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L1_007_365G1_scaffold_406_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35404..35955)
DNA (552bp) protein (184aa)
RNA polymerase sigma-70 factor n=6 Tax=Bacteroides RepID=D4WFH2_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY63763.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L1_007_365G1_scaffold_406_28
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36056..36301)
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D6N7_9BACE
Protein of unknown function (DUF3098).
Uncharacterized protein {ECO:0000313|EMBL:CBK65682.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L1_007_365G1_scaffold_406_29
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36313..39447)
DNA (3135bp) protein (1045aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QD74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO49908.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Na+/H+ antiporter
L1_007_365G1_scaffold_406_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40327..41430)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AIK4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87162.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
Displaying items 1-30 of 61 in total

View Taxonomy