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L1_007_365G1_scaffold_410

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_410_1
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..682)
DNA (681bp) protein (227aa)
MATE efflux family protein n=4 Tax=Erysipelotrichaceae RepID=B0N2X5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM91956.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
mate efflux family protein
L1_007_365G1_scaffold_410_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1015..1944
DNA (930bp) protein (310aa)
Site-specific recombinase, phage integrase family n=5 Tax=Erysipelotrichaceae RepID=B0N2X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48223.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Site-specific recombinase XerD
L1_007_365G1_scaffold_410_3
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3337..4992)
DNA (1656bp) protein (552aa)
DAK2 domain fusion protein YloV n=4 Tax=Erysipelotrichaceae RepID=B0N2X3_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EDS19400.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DAK2 domain-containing protein YloV
L1_007_365G1_scaffold_410_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5005..5361)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48221.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L1_007_365G1_scaffold_410_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5591..5776
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=5 Tax=Erysipelotrichaceae RepID=B0N2X1_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rpmB; 50S ribosomal protein L28
L1_007_365G1_scaffold_410_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5976..7334
DNA (1359bp) protein (453aa)
Glycosyl hydrolase, family 1 n=3 Tax=Erysipelotrichaceae RepID=B0N2X0_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS19397.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
beta-glucosidase
L1_007_365G1_scaffold_410_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7426..8244
DNA (819bp) protein (273aa)
YihY family protein n=2 Tax=Erysipelotrichaceae RepID=H1AGT6_9FIRM
YihY family protein {ECO:0000313|EMBL:EHQ48218.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ribonuclease bn
L1_007_365G1_scaffold_410_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8280..9404)
DNA (1125bp) protein (375aa)
Chaperone protein DnaJ n=3 Tax=Erysipelotrichaceae RepID=B0N2W8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaJ; chaperone protein DnaJ
L1_007_365G1_scaffold_410_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9465..11282)
DNA (1818bp) protein (606aa)
Chaperone protein DnaK n=5 Tax=Erysipelotrichaceae RepID=B0N2W7_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
dnaK; chaperone protein DnaK
L1_007_365G1_scaffold_410_10
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11300..11842)
DNA (543bp) protein (181aa)
Protein GrpE n=4 Tax=Coprobacillus RepID=C3RKE5_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
grpE; heat shock protein GrpE
L1_007_365G1_scaffold_410_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11854..12894)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=5 Tax=Erysipelotrichaceae RepID=B0N2W5_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hrcA; heat-inducible transcription repressor
L1_007_365G1_scaffold_410_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13081..13704)
DNA (624bp) protein (208aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RKE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34237.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
flavin reductase domain-containing protein
L1_007_365G1_scaffold_410_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13825..14919)
DNA (1095bp) protein (365aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Coprobacillus sp. D7 RepID=C3RKE2_9FIRM
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCZ34238.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_410_14
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14909..16123)
DNA (1215bp) protein (405aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=5 Tax=Erysipelotrichaceae RepID=B0N2W2_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CCZ34239.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_365G1_scaffold_410_15
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16132..17079)
DNA (948bp) protein (316aa)
DNA polymerase III, delta subunit n=5 Tax=Erysipelotrichaceae RepID=B0N2W1_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CCZ34240.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
yqeN; putative protein YqeN
L1_007_365G1_scaffold_410_16
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17115..19121)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RKD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48209.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
DNA internalization-related competence protein ComEC/Rec2
L1_007_365G1_scaffold_410_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19112..19612)
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2V9_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EHM91940.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
competence protein ComEA
L1_007_365G1_scaffold_410_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19605..20594)
DNA (990bp) protein (330aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Erysipelotrichaceae RepID=B0N2V8_9FIRM
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
L1_007_365G1_scaffold_410_19
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20605..21171)
DNA (567bp) protein (189aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=5 Tax=Erysipelotrichaceae RepID=B0N2V7_9FIRM
L1_007_365G1_scaffold_410_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21298..22581)
DNA (1284bp) protein (428aa)
GTPase Obg n=2 Tax=Coprobacillus RepID=G9R194_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
GTPase CgtA
L1_007_365G1_scaffold_410_21
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(22668..22952)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=5 Tax=Erysipelotrichaceae RepID=C3RKD4_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
rpmA; 50S ribosomal protein L27
L1_007_365G1_scaffold_410_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22956..23279)
DNA (324bp) protein (108aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19381.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Predicted ribosomal protein
L1_007_365G1_scaffold_410_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(23284..23628)
DNA (345bp) protein (115aa)
50S ribosomal protein L21 n=5 Tax=Erysipelotrichaceae RepID=B0N2V3_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
rplU; 50S ribosomal protein L21
L1_007_365G1_scaffold_410_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23751..24494)
DNA (744bp) protein (248aa)
spoIVFB; Stage IV sporulation protein FB (EC:3.4.24.-)
Peptidase, M50 family n=4 Tax=Erysipelotrichaceae RepID=B0N2V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ48201.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_365G1_scaffold_410_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24469..25047)
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N2V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91932.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L1_007_365G1_scaffold_410_26
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25096..25875)
DNA (780bp) protein (260aa)
Site-determining protein n=5 Tax=Erysipelotrichaceae RepID=B0N2V0_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
septum site-determining protein MinD
L1_007_365G1_scaffold_410_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25868..26443)
DNA (576bp) protein (192aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G9R187_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34270.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
minC; septum site-determining protein MinC
L1_007_365G1_scaffold_410_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26418..26951)
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=C3RKC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34271.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
cell shape-determining protein
L1_007_365G1_scaffold_410_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26944..27789)
DNA (846bp) protein (282aa)
Cell shape-determining protein MreC n=4 Tax=Erysipelotrichaceae RepID=B0N2U7_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
rod shape-determining protein MreC
L1_007_365G1_scaffold_410_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27847..28524)
DNA (678bp) protein (226aa)
DNA repair protein RadC n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N2U6_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EDS19373.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
Displaying items 1-30 of 63 in total

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