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L1_007_365G1_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_438_1
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(157..1383)
DNA (1227bp) protein (409aa)
Metallo-beta-lactamase domain protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UJS7_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERT58708.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
Uncharacterized flavoproteins
L1_007_365G1_scaffold_438_2
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1408..3324)
DNA (1917bp) protein (639aa)
Rubredoxin n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UHB1_9FIRM
Rubredoxin {ECO:0000313|EMBL:ERT58676.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
hypothetical protein
L1_007_365G1_scaffold_438_3
Anaeroglobus geminatus, Anaeroglobus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3356..3763)
DNA (408bp) protein (136aa)
Transcriptional regulator, Rrf2 family n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YG28_9FIRM
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EHM42458.1}; TaxID=861450 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaeroglobus.;" source="Anaeroglobus geminatus F0357.;"
hypothetical protein
L1_007_365G1_scaffold_438_4
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4065..5249)
DNA (1185bp) protein (395aa)
Amidohydrolase n=2 Tax=Megasphaera RepID=S7HL33_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EPP16479.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
amidohydrolase
L1_007_365G1_scaffold_438_5
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5448..6815
DNA (1368bp) protein (456aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
M18 family aminopeptidase n=2 Tax=Megasphaera RepID=S7J2I9_9FIRM
M18 family aminopeptidase
L1_007_365G1_scaffold_438_6
unknown

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comp(6744..6893)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_007_365G1_scaffold_438_7
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6937..7488)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9DPJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU79275.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
padR; putative PadR family transcription regulator
L1_007_365G1_scaffold_438_8
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7673..8203
DNA (531bp) protein (177aa)
pad; putative phenolic acid decarboxylase (EC:4.1.1.-)
Phenolic acid decarboxylase padC n=1 Tax=Veillonella ratti ACS-216-V-Col6b RepID=K9D7T1_9FIRM
Phenolic acid decarboxylase padC {ECO:0000313|EMBL:EKU79276.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L1_007_365G1_scaffold_438_9
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8281..9168)
DNA (888bp) protein (296aa)
Predicted transporter protein n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VM80_MEGEL
predicted transporter protein
Predicted transporter protein {ECO:0000313|EMBL:CCC72642.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L1_007_365G1_scaffold_438_10
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9310..9993)
DNA (684bp) protein (228aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Anaerostipes RepID=B0MGI3_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDR96743.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
cyclic nucleotide-binding domain-containing protein
L1_007_365G1_scaffold_438_11
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10051..10443
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38431.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_007_365G1_scaffold_438_12
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10566..11558)
DNA (993bp) protein (331aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0P4_PELTS
FixB; electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:BAF60183.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
L1_007_365G1_scaffold_438_13
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(11574..12365)
DNA (792bp) protein (264aa)
Electron transfer flavoprotein, beta subunit id=2089065 bin=GWE2_Bacteroidetes_42_42 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Electron transfer flavoprotein alpha/beta-subunit
Tax=GWF2_Bacteroidetes_43_63_curated
L1_007_365G1_scaffold_438_14
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(12384..13520)
DNA (1137bp) protein (379aa)
Acyl-CoA dehydrogenase n=1 Tax=Salimicrobium sp. MJ3 RepID=K2H6P6_9BACI
mmqC; acyl-CoA dehydrogenase
Tax=BJP_08E140C01_Actinomycetales_70_11
L1_007_365G1_scaffold_438_15
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13782..14381
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJI1_9FIRM
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIF52925.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L1_007_365G1_scaffold_438_16
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(14462..15808)
DNA (1347bp) protein (449aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MY82_9FIRM
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:CDF04758.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
acetyl-CoA hydrolase/transferase
L1_007_365G1_scaffold_438_17
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(15989..16204)
DNA (216bp) protein (72aa)
Sec-independent protein translocase protein TatA n=2 Tax=Megasphaera RepID=S7HQD5_9FIRM
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
sec-independent protein translocase protein tatA/E homolog
L1_007_365G1_scaffold_438_18
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(16250..16738)
DNA (489bp) protein (163aa)
Flavodoxin family protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MWP9_9FIRM
Flavodoxin family protein {ECO:0000313|EMBL:CDF04756.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_365G1_scaffold_438_19
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16995..17909
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MW37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04755.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
hypothetical protein
L1_007_365G1_scaffold_438_20
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(18064..18549)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RJK6_ACIFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB47258.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L1_007_365G1_scaffold_438_21
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(18743..19228)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RJK6_ACIFV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB47258.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4).;"
L1_007_365G1_scaffold_438_22
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19256..19741)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HPV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP18562.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
L1_007_365G1_scaffold_438_23
unknown

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comp(19940..20425)
DNA (486bp) protein (162aa)

This feature has no annotations

L1_007_365G1_scaffold_438_24
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20619..21956)
DNA (1338bp) protein (446aa)
Acetyl-CoA hydrolase n=1 Tax=Megasphaera sp. NM10 RepID=S7J7U2_9FIRM
Acetyl-CoA hydrolase {ECO:0000313|EMBL:EPP18240.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
ACH1; acetyl-CoA hydrolase
L1_007_365G1_scaffold_438_25
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21963..23159)
DNA (1197bp) protein (399aa)
Aminotransferase n=2 Tax=Megasphaera RepID=G0VP77_MEGEL
aminotransferase
Aminotransferase {ECO:0000313|EMBL:CDF05772.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
L1_007_365G1_scaffold_438_26
Megasphaera sp. UPII 135-E, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(23188..24537)
DNA (1350bp) protein (450aa)
Serine transporter n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MQA3_9FIRM
Serine transporter {ECO:0000313|EMBL:EGS32663.1}; TaxID=1000569 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. UPII 135-E.;"
serine transporter
L1_007_365G1_scaffold_438_27
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24617..25192)
DNA (576bp) protein (192aa)
Indolepyruvate oxidoreductase subunit beta {ECO:0000313|EMBL:EPP18239.1}; EC=1.2.7.8 {ECO:0000313|EMBL:EPP18239.1};; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit beta n=2 Tax=Megasphaera RepID=S7HRA9_9FIRM
L1_007_365G1_scaffold_438_28
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(25194..26975)
DNA (1782bp) protein (594aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
Indolepyruvate oxidoreductase subunit n=2 Tax=Megasphaera RepID=S7HRJ3_9FIRM
iorA; indolepyruvate oxidoreductase subunit
L1_007_365G1_scaffold_438_29
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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27209..29089
DNA (1881bp) protein (627aa)
Putative sigma-54 specific transcriptional regulator n=1 Tax=Megasphaera sp. BL7 RepID=S7HJ04_9FIRM
Putative sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:EPP18237.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
putative sigma54 specific transcriptional regulator
L1_007_365G1_scaffold_438_30
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(29095..30372)
DNA (1278bp) protein (426aa)
RNA polymerase sigma-54 factor n=2 Tax=Megasphaera RepID=G0VMA3_MEGEL
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CCC72665.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
Displaying items 1-30 of 46 in total

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