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L1_007_365G1_scaffold_445

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_365G1_scaffold_445_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..765
-----------------
DNA (765bp)
protein (255aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Bacteroides RepID=A5ZFD5_9BACE
L1_007_365G1_scaffold_445_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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825..1274
-----------------
DNA (450bp)
protein (150aa)
Sporulation and cell division repeat protein n=3 Tax=Bacteroides RepID=A5ZFD6_9BACE
Sporulation and cell division repeat protein {ECO:0000313|EMBL:EDM20896.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Sporulation related domain.
L1_007_365G1_scaffold_445_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1282..1875
-----------------
DNA (594bp)
protein (198aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=3 Tax=Bacteroides RepID=A5ZFD7_9BACE
L1_007_365G1_scaffold_445_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1995..4097)
-----------------
DNA (2103bp)
protein (701aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA primase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q2N1_9BACE
DNA primase
L1_007_365G1_scaffold_445_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4213..4986)
-----------------
DNA (774bp)
protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VDE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71957.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_365G1_scaffold_445_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5192..6253)
-----------------
DNA (1062bp)
protein (354aa)
chorismate mutase (EC:2.5.1.54 5.4.99.5)
Putative 3-deoxy-7-phosphoheptulonate synthase n=2 Tax=Bacteroides RepID=A5ZFE1_9BACE
Putative 3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDM20901.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_007_365G1_scaffold_445_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6258..7445)
-----------------
DNA (1188bp)
protein (396aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM20902.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM20902.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Aminotransferase, class I/II n=2 Tax=Bacteroides caccae RepID=A5ZFE2_9BACE
Aspartate/tyrosine/aromatic aminotransferase
L1_007_365G1_scaffold_445_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7420..8268)
-----------------
DNA (849bp)
protein (283aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=3 Tax=Bacteroides RepID=A5ZFE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71960.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_365G1_scaffold_445_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8610..9572)
-----------------
DNA (963bp)
protein (321aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides caccae RepID=A5ZFE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23356.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_365G1_scaffold_445_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9614..11518)
-----------------
DNA (1905bp)
protein (635aa)
RecQ family ATP-dependent DNA helicase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDF0_9BACE
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EIY23357.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP-dependent DNA helicase RecQ
L1_007_365G1_scaffold_445_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11511..13229)
-----------------
DNA (1719bp)
protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDM20906.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDM20906.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Single-stranded-DNA-specific exonuclease RecJ n=3 Tax=Bacteroides RepID=A5ZFE6_9BACE
single-stranded-DNA-specific exonuclease recJ
L1_007_365G1_scaffold_445_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13771..14205)
-----------------
DNA (435bp)
protein (145aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=A5ZFE7_9BACE
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EIY23359.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_365G1_scaffold_445_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14317..14847
-----------------
DNA (531bp)
protein (177aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Bacteroides RepID=A5ZFE8_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIY23360.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
translation factor SUA5
L1_007_365G1_scaffold_445_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14848..16641
-----------------
DNA (1794bp)
protein (598aa)
Chloride transporter, ClC family n=3 Tax=Bacteroides RepID=A5ZFE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71966.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Chloride channel protein EriC
L1_007_365G1_scaffold_445_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16703..17671
-----------------
DNA (969bp)
protein (323aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=Bacteroides RepID=A5ZFF0_9BACE
L1_007_365G1_scaffold_445_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17736..18386
-----------------
DNA (651bp)
protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=3 Tax=Bacteroides RepID=A5ZFG1_9BACE
L1_007_365G1_scaffold_445_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18393..20519
-----------------
DNA (2127bp)
protein (709aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9ESN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23364.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
competence protein
L1_007_365G1_scaffold_445_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20566..21603
-----------------
DNA (1038bp)
protein (346aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23365.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Exopolyphosphatase-related proteins
L1_007_365G1_scaffold_445_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21722..22372
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZFG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20924.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_007_365G1_scaffold_445_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22409..23800
-----------------
DNA (1392bp)
protein (464aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=4 Tax=root RepID=A5ZFG5_9BACE
Phosphoglucosamine mutase {ECO:0000313|EMBL:EIY23367.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_007_365G1_scaffold_445_21
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23912..26290)
-----------------
DNA (2379bp)
protein (793aa)
TonB-dependent receptor n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UC02_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:CCZ73129.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Outer membrane receptor proteins, mostly Fe transport
L1_007_365G1_scaffold_445_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26480..27814
-----------------
DNA (1335bp)
protein (445aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23369.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_007_365G1_scaffold_445_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27834..28436)
-----------------
DNA (603bp)
protein (201aa)
Transcriptional regulator, LuxR family n=4 Tax=root RepID=A5ZFG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73131.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LuxR family transcriptional regulator
L1_007_365G1_scaffold_445_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28443..30104)
-----------------
DNA (1662bp)
protein (554aa)
Uncharacterized protein n=3 Tax=root RepID=A5ZFG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20929.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
NAD-utilizing dehydrogenase
L1_007_365G1_scaffold_445_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30162..31529)
-----------------
DNA (1368bp)
protein (456aa)
DNA repair protein radA n=3 Tax=Bacteroides RepID=A5ZFH0_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA repair protein RadA
L1_007_365G1_scaffold_445_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31750..32733)
-----------------
DNA (984bp)
protein (328aa)
asparaginase (EC:3.5.1.1)
Asparaginase n=2 Tax=Bacteroides RepID=R5UC07_9BACE
Asparaginase {ECO:0000313|EMBL:CCZ73134.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_365G1_scaffold_445_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33187..35628
-----------------
DNA (2442bp)
protein (814aa)
Homoserine dehydrogenase n=2 Tax=Bacteroides RepID=A5ZFH3_9BACE
Homoserine dehydrogenase {ECO:0000313|EMBL:CCZ73135.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
L1_007_365G1_scaffold_445_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35635..36843
-----------------
DNA (1209bp)
protein (403aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=2 Tax=Bacteroides RepID=A5ZFH4_9BACE
Putative homoserine kinase {ECO:0000313|EMBL:EDM20934.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_007_365G1_scaffold_445_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36857..38158
-----------------
DNA (1302bp)
protein (434aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=3 Tax=Bacteroides RepID=A5ZFH5_9BACE
Threonine synthase {ECO:0000313|EMBL:CCZ73137.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_007_365G1_scaffold_445_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38335..38961)
-----------------
DNA (627bp)
protein (209aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=3 Tax=Bacteroides RepID=A5ZFH6_9BACE
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCZ73138.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Displaying items 1-30 of 44 in total

View Taxonomy